Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 MIR4469-201ENST00000583919 79 ntBASIC16.9■□□□□ 0.3
RAI2Q9Y5P3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.9■□□□□ 0.3
RAI2Q9Y5P3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.9■□□□□ 0.3
RAI2Q9Y5P3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.9■□□□□ 0.3
RAI2Q9Y5P3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAI2Q9Y5P3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAI2Q9Y5P3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAI2Q9Y5P3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAI2Q9Y5P3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAI2Q9Y5P3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.9■□□□□ 0.3
RAI2Q9Y5P3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAI2Q9Y5P3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAI2Q9Y5P3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAI2Q9Y5P3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAI2Q9Y5P3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RAI2Q9Y5P3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RAI2Q9Y5P3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RAI2Q9Y5P3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAI2Q9Y5P3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAI2Q9Y5P3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAI2Q9Y5P3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.9■□□□□ 0.3
RAI2Q9Y5P3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.9■□□□□ 0.3
RAI2Q9Y5P3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.89■□□□□ 0.3
RAI2Q9Y5P3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAI2Q9Y5P3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
RAI2Q9Y5P3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAI2Q9Y5P3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RAI2Q9Y5P3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.89■□□□□ 0.3
RAI2Q9Y5P3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAI2Q9Y5P3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAI2Q9Y5P3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 RNU1-129P-201ENST00000384064 167 ntBASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 U1.21-201ENST00000580816 167 ntBASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 AC068137.2-201ENST00000605408 478 ntBASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 AL031055.1-201ENST00000606362 631 ntBASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 AC006538.1-201ENST00000567905 1585 ntBASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAI2Q9Y5P3 AC092919.2-201ENST00000623631 1645 ntBASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 HLA-A-202ENST00000376806 1854 ntBASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 MCCD1P2-201ENST00000423228 335 ntBASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 YBX1P5-201ENST00000509441 847 ntBASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 UBALD1-205ENST00000590891 2641 ntBASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAI2Q9Y5P3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms