Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM17Q9Y577 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.7■□□□□ 0.58
TRIM17Q9Y577 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.7■□□□□ 0.58
TRIM17Q9Y577 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM17Q9Y577 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.7■□□□□ 0.58
TRIM17Q9Y577 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM17Q9Y577 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM17Q9Y577 LINC00304-203ENST00000565008 1864 ntBASIC18.7■□□□□ 0.58
TRIM17Q9Y577 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM17Q9Y577 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM17Q9Y577 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM17Q9Y577 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM17Q9Y577 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM17Q9Y577 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM17Q9Y577 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM17Q9Y577 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM17Q9Y577 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM17Q9Y577 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM17Q9Y577 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM17Q9Y577 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM17Q9Y577 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM17Q9Y577 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 MIR1247-201ENST00000408206 136 ntBASIC18.69■□□□□ 0.58
TRIM17Q9Y577 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 RPSAP52-203ENST00000622976 1023 ntBASIC18.69■□□□□ 0.58
TRIM17Q9Y577 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM17Q9Y577 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 GPAA1P2-201ENST00000417923 928 ntBASIC18.68■□□□□ 0.58
TRIM17Q9Y577 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 RNA5SP423-201ENST00000517127 109 ntBASIC18.68■□□□□ 0.58
TRIM17Q9Y577 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 MIR6069-201ENST00000620069 79 ntBASIC18.68■□□□□ 0.58
TRIM17Q9Y577 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 AL021920.2-201ENST00000624828 1351 ntBASIC18.68■□□□□ 0.58
TRIM17Q9Y577 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM17Q9Y577 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRIM17Q9Y577 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM17Q9Y577 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM17Q9Y577 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM17Q9Y577 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRIM17Q9Y577 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRIM17Q9Y577 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM17Q9Y577 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM17Q9Y577 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
TRIM17Q9Y577 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM17Q9Y577 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM17Q9Y577 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
TRIM17Q9Y577 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM17Q9Y577 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms