Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP3Q9Y446 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PKP3Q9Y446 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP3Q9Y446 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
PKP3Q9Y446 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP3Q9Y446 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PKP3Q9Y446 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.81■□□□□ 0.28
PKP3Q9Y446 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP3Q9Y446 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PKP3Q9Y446 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.81■□□□□ 0.28
PKP3Q9Y446 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PKP3Q9Y446 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PKP3Q9Y446 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PKP3Q9Y446 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKP3Q9Y446 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.8■□□□□ 0.28
PKP3Q9Y446 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKP3Q9Y446 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKP3Q9Y446 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PKP3Q9Y446 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
PKP3Q9Y446 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKP3Q9Y446 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKP3Q9Y446 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKP3Q9Y446 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PKP3Q9Y446 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.8■□□□□ 0.28
PKP3Q9Y446 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
PKP3Q9Y446 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PKP3Q9Y446 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PKP3Q9Y446 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.8■□□□□ 0.28
PKP3Q9Y446 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.8■□□□□ 0.28
PKP3Q9Y446 RNA5SP416-201ENST00000516838 111 ntBASIC16.8■□□□□ 0.28
PKP3Q9Y446 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKP3Q9Y446 MIR4515-201ENST00000584082 81 ntBASIC16.8■□□□□ 0.28
PKP3Q9Y446 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.8■□□□□ 0.28
PKP3Q9Y446 AC027601.4-201ENST00000611259 610 ntBASIC16.8■□□□□ 0.28
PKP3Q9Y446 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PKP3Q9Y446 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.8■□□□□ 0.28
PKP3Q9Y446 AC010507.1-201ENST00000633895 436 ntBASIC16.8■□□□□ 0.28
PKP3Q9Y446 AC007064.4-201ENST00000637740 555 ntBASIC16.8■□□□□ 0.28
PKP3Q9Y446 AL645728.2-201ENST00000641974 660 ntBASIC16.8■□□□□ 0.28
PKP3Q9Y446 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.8■□□□□ 0.28
PKP3Q9Y446 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.8■□□□□ 0.28
PKP3Q9Y446 FLJ38576-201ENST00000623820 2459 ntBASIC16.8■□□□□ 0.28
PKP3Q9Y446 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PKP3Q9Y446 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PKP3Q9Y446 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.8■□□□□ 0.28
PKP3Q9Y446 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
PKP3Q9Y446 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PKP3Q9Y446 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PKP3Q9Y446 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKP3Q9Y446 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PKP3Q9Y446 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PKP3Q9Y446 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKP3Q9Y446 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKP3Q9Y446 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKP3Q9Y446 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PKP3Q9Y446 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PKP3Q9Y446 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PKP3Q9Y446 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
PKP3Q9Y446 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.79■□□□□ 0.28
PKP3Q9Y446 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.79■□□□□ 0.28
PKP3Q9Y446 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKP3Q9Y446 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKP3Q9Y446 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PKP3Q9Y446 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PKP3Q9Y446 AL022342.1-201ENST00000400363 863 ntBASIC16.79■□□□□ 0.28
PKP3Q9Y446 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
PKP3Q9Y446 MED15P5-201ENST00000423150 992 ntBASIC16.79■□□□□ 0.28
PKP3Q9Y446 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PKP3Q9Y446 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.79■□□□□ 0.28
PKP3Q9Y446 HLA-J-202ENST00000469281 1241 ntBASIC16.79■□□□□ 0.28
PKP3Q9Y446 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.79■□□□□ 0.28
PKP3Q9Y446 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.79■□□□□ 0.28
PKP3Q9Y446 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKP3Q9Y446 AC023141.13-201ENST00000604991 943 ntBASIC16.79■□□□□ 0.28
PKP3Q9Y446 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PKP3Q9Y446 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.79■□□□□ 0.28
PKP3Q9Y446 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PKP3Q9Y446 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKP3Q9Y446 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.79■□□□□ 0.28
PKP3Q9Y446 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PKP3Q9Y446 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.79■□□□□ 0.28
PKP3Q9Y446 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.79■□□□□ 0.28
PKP3Q9Y446 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKP3Q9Y446 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.79■□□□□ 0.28
PKP3Q9Y446 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PKP3Q9Y446 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKP3Q9Y446 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PKP3Q9Y446 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKP3Q9Y446 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKP3Q9Y446 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.78■□□□□ 0.28
PKP3Q9Y446 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PKP3Q9Y446 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKP3Q9Y446 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PKP3Q9Y446 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PKP3Q9Y446 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.78■□□□□ 0.28
PKP3Q9Y446 AC006538.1-201ENST00000567905 1585 ntBASIC16.78■□□□□ 0.28
PKP3Q9Y446 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKP3Q9Y446 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.78■□□□□ 0.28
PKP3Q9Y446 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.78■□□□□ 0.28
PKP3Q9Y446 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms