Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 AC119751.2-201ENST00000504529 210 ntBASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 AL033527.4-201ENST00000641026 673 ntBASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 AL109936.8-201ENST00000641772 604 ntBASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 SNX33P1-201ENST00000592116 1762 ntBASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 LINC02012-201ENST00000608206 1725 ntBASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTCBQ9Y3I0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 AC098850.1-201ENST00000419919 790 ntBASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 AC234783.1-201ENST00000441761 496 ntBASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 AC093724.1-201ENST00000448659 1027 ntBASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 AP005482.1-201ENST00000563722 1273 ntBASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 AC061975.2-201ENST00000581722 295 ntBASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 AL606495.2-201ENST00000605867 535 ntBASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 AC093726.1-201ENST00000608064 963 ntBASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RTCBQ9Y3I0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.83■□□□□ 0.92
RTCBQ9Y3I0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RTCBQ9Y3I0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
RTCBQ9Y3I0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RTCBQ9Y3I0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RTCBQ9Y3I0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
RTCBQ9Y3I0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.83■□□□□ 0.92
RTCBQ9Y3I0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
RTCBQ9Y3I0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RTCBQ9Y3I0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 AC007389.4-201ENST00000454674 793 ntBASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 MIR6069-201ENST00000620069 79 ntBASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 COX11-210ENST00000639671 696 ntBASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTCBQ9Y3I0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms