Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP4E1Q9UPM8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP4E1Q9UPM8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP4E1Q9UPM8 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP4E1Q9UPM8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP4E1Q9UPM8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP4E1Q9UPM8 GGT3P-204ENST00000453783 1664 ntBASIC17.33■□□□□ 0.37
AP4E1Q9UPM8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP4E1Q9UPM8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP4E1Q9UPM8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.33■□□□□ 0.37
AP4E1Q9UPM8 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
AP4E1Q9UPM8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 HMGA1P7-201ENST00000406908 502 ntBASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 AL031432.2-201ENST00000566714 459 ntBASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 AC018845.2-201ENST00000568326 409 ntBASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 AL928711.1-201ENST00000570165 459 ntBASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP4E1Q9UPM8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 AC106730.1-201ENST00000566722 1090 ntBASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.32■□□□□ 0.36
AP4E1Q9UPM8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 RNU1-129P-201ENST00000384064 167 ntBASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 KRT18P2-201ENST00000447938 1258 ntBASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 U1.21-201ENST00000580816 167 ntBASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 AC023141.13-201ENST00000604991 943 ntBASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 AC007064.4-201ENST00000637740 555 ntBASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
AP4E1Q9UPM8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms