Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 FRMD8P1-201ENST00000440433 1524 ntBASIC14.17□□□□□ -0.14
CLN8Q9UBY8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 AC079328.2-201ENST00000561241 3354 ntBASIC14.17□□□□□ -0.14
CLN8Q9UBY8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 AC087163.2-201ENST00000457299 853 ntBASIC14.17□□□□□ -0.14
CLN8Q9UBY8 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 AC092865.5-201ENST00000545435 363 ntBASIC14.17□□□□□ -0.14
CLN8Q9UBY8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 AC002347.1-201ENST00000569543 541 ntBASIC14.17□□□□□ -0.14
CLN8Q9UBY8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 FLJ38576-201ENST00000623820 2459 ntBASIC14.17□□□□□ -0.14
CLN8Q9UBY8 AC005915.1-201ENST00000624912 2018 ntBASIC14.17□□□□□ -0.14
CLN8Q9UBY8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN8Q9UBY8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 AC129492.6-201ENST00000611383 1305 ntBASIC14.16□□□□□ -0.14
CLN8Q9UBY8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 BX842568.4-201ENST00000421222 227 ntBASIC14.16□□□□□ -0.14
CLN8Q9UBY8 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.16□□□□□ -0.14
CLN8Q9UBY8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 AC023511.2-201ENST00000618803 211 ntBASIC14.16□□□□□ -0.14
CLN8Q9UBY8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 PCDH8P1-201ENST00000428983 2773 ntBASIC14.16□□□□□ -0.14
CLN8Q9UBY8 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CLN8Q9UBY8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
CLN8Q9UBY8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.15□□□□□ -0.14
CLN8Q9UBY8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLN8Q9UBY8 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
CLN8Q9UBY8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLN8Q9UBY8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms