Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 UXT-AS1-201ENST00000590504 1525 ntBASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 KRT18P34-201ENST00000488218 1270 ntBASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 AP000842.3-202ENST00000569238 1080 ntBASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 AC015911.4-201ENST00000588022 1070 ntBASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 AC027307.2-201ENST00000591252 911 ntBASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 AL139011.1-202ENST00000642063 584 ntBASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 AL671710.1-201ENST00000610245 2349 ntBASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 PCDHB18P-201ENST00000524813 2368 ntBASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 AL512356.2-201ENST00000546955 174 ntBASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 AP001059.3-201ENST00000619053 235 ntBASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 KRT8P39-201ENST00000396270 1433 ntBASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLCF1Q9UBD9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CLCF1Q9UBD9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLCF1Q9UBD9 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.81□□□□□ -0.04
CLCF1Q9UBD9 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLCF1Q9UBD9 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
CLCF1Q9UBD9 OR6D1P-203ENST00000641209 4860 ntBASIC14.81□□□□□ -0.04
CLCF1Q9UBD9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLCF1Q9UBD9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLCF1Q9UBD9 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.81□□□□□ -0.04
CLCF1Q9UBD9 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.81□□□□□ -0.04
CLCF1Q9UBD9 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLCF1Q9UBD9 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CLCF1Q9UBD9 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms