Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 AL353135.1-201ENST00000606729 504 ntBASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 AC008735.5-201ENST00000623544 497 ntBASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 BANP-201ENST00000286122 2368 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 LINC02012-201ENST00000608206 1725 ntBASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00474Q9P2X8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 UNC93B7-201ENST00000509439 705 ntBASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 PENK-208ENST00000523051 772 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 AC025062.2-201ENST00000605477 670 ntBASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 AL805961.1-202ENST00000641562 540 ntBASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00474Q9P2X8 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms