Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TLR9Q9NR96 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TLR9Q9NR96 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TLR9Q9NR96 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.62■□□□□ 0.41
TLR9Q9NR96 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TLR9Q9NR96 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TLR9Q9NR96 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TLR9Q9NR96 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TLR9Q9NR96 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TLR9Q9NR96 AC134043.2-201ENST00000624206 2238 ntBASIC17.62■□□□□ 0.41
TLR9Q9NR96 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR9Q9NR96 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR9Q9NR96 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TLR9Q9NR96 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.61■□□□□ 0.41
TLR9Q9NR96 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TLR9Q9NR96 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.61■□□□□ 0.41
TLR9Q9NR96 AC073439.1-201ENST00000624121 1774 ntBASIC17.61■□□□□ 0.41
TLR9Q9NR96 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR9Q9NR96 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR9Q9NR96 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR9Q9NR96 ARSEP1-201ENST00000420443 635 ntBASIC17.61■□□□□ 0.41
TLR9Q9NR96 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.61■□□□□ 0.41
TLR9Q9NR96 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.61■□□□□ 0.41
TLR9Q9NR96 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.61■□□□□ 0.41
TLR9Q9NR96 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.61■□□□□ 0.41
TLR9Q9NR96 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TLR9Q9NR96 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.61■□□□□ 0.41
TLR9Q9NR96 API5-211ENST00000534695 560 ntTSL 5 BASIC17.61■□□□□ 0.41
TLR9Q9NR96 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.61■□□□□ 0.41
TLR9Q9NR96 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.61■□□□□ 0.41
TLR9Q9NR96 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TLR9Q9NR96 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.61■□□□□ 0.41
TLR9Q9NR96 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TLR9Q9NR96 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR9Q9NR96 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TLR9Q9NR96 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR9Q9NR96 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR9Q9NR96 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR9Q9NR96 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR9Q9NR96 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TLR9Q9NR96 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR9Q9NR96 AC138969.3-201ENST00000546612 1459 ntBASIC17.61■□□□□ 0.41
TLR9Q9NR96 AC138932.2-201ENST00000548268 1459 ntBASIC17.61■□□□□ 0.41
TLR9Q9NR96 AC126755.4-201ENST00000549796 1459 ntBASIC17.61■□□□□ 0.41
TLR9Q9NR96 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TLR9Q9NR96 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR9Q9NR96 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR9Q9NR96 AC116353.5-201ENST00000638148 1699 ntBASIC17.61■□□□□ 0.41
TLR9Q9NR96 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR9Q9NR96 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR9Q9NR96 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.61■□□□□ 0.41
TLR9Q9NR96 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TLR9Q9NR96 AC108860.2-201ENST00000562760 2183 ntBASIC17.6■□□□□ 0.41
TLR9Q9NR96 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TLR9Q9NR96 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TLR9Q9NR96 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TLR9Q9NR96 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TLR9Q9NR96 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TLR9Q9NR96 AC098614.1-201ENST00000368528 745 ntBASIC17.6■□□□□ 0.41
TLR9Q9NR96 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
TLR9Q9NR96 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TLR9Q9NR96 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TLR9Q9NR96 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TLR9Q9NR96 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TLR9Q9NR96 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TLR9Q9NR96 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TLR9Q9NR96 U91328.1-201ENST00000437528 223 ntBASIC17.6■□□□□ 0.41
TLR9Q9NR96 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.6■□□□□ 0.41
TLR9Q9NR96 GPR53P-205ENST00000457298 1084 ntBASIC17.6■□□□□ 0.41
TLR9Q9NR96 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
TLR9Q9NR96 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.6■□□□□ 0.41
TLR9Q9NR96 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.6■□□□□ 0.41
TLR9Q9NR96 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TLR9Q9NR96 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.6■□□□□ 0.41
TLR9Q9NR96 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.6■□□□□ 0.41
TLR9Q9NR96 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.6■□□□□ 0.41
TLR9Q9NR96 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.6■□□□□ 0.41
TLR9Q9NR96 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
TLR9Q9NR96 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.6■□□□□ 0.41
TLR9Q9NR96 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.6■□□□□ 0.41
TLR9Q9NR96 AC004840.1-201ENST00000636359 365 ntBASIC17.6■□□□□ 0.41
TLR9Q9NR96 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.6■□□□□ 0.41
TLR9Q9NR96 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TLR9Q9NR96 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TLR9Q9NR96 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.6■□□□□ 0.41
TLR9Q9NR96 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TLR9Q9NR96 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.6■□□□□ 0.41
TLR9Q9NR96 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TLR9Q9NR96 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TLR9Q9NR96 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TLR9Q9NR96 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TLR9Q9NR96 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.6■□□□□ 0.41
TLR9Q9NR96 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.6■□□□□ 0.41
TLR9Q9NR96 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TLR9Q9NR96 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TLR9Q9NR96 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.59■□□□□ 0.41
TLR9Q9NR96 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR9Q9NR96 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR9Q9NR96 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR9Q9NR96 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms