Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 YBX2P1-201ENST00000394192 760 ntBASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 AC092865.5-201ENST00000545435 363 ntBASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 AC023511.2-201ENST00000618803 211 ntBASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 AC011676.5-201ENST00000624864 2660 ntBASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 AC068137.2-201ENST00000605408 478 ntBASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 OR6D1P-203ENST00000641209 4860 ntBASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 AL513477.1-201ENST00000602865 2407 ntBASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRDM9Q9NQV7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 RNF216P1-203ENST00000404404 2427 ntBASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRDM9Q9NQV7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms