Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 AC109635.5-201ENST00000533593 962 ntBASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 AC106730.1-201ENST00000566722 1090 ntBASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 AC004877.2-201ENST00000623941 599 ntBASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 AC025580.3-201ENST00000617932 1424 ntBASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.65■□□□□ 0.58
CCSER1Q9C0I3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCSER1Q9C0I3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCSER1Q9C0I3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCSER1Q9C0I3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.64■□□□□ 0.58
CCSER1Q9C0I3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 TNRC18P3-201ENST00000441896 2691 ntBASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 AC007967.2-201ENST00000432613 625 ntBASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 AC018845.2-201ENST00000568326 409 ntBASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 AL009183.1-201ENST00000603760 355 ntBASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 ZNF259P1-201ENST00000407656 1365 ntBASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 PCDH8P1-201ENST00000428983 2773 ntBASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCSER1Q9C0I3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms