Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 AL606495.2-201ENST00000605867 535 ntBASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 GPAA1P2-202ENST00000606848 1787 ntBASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 AL390961.4-201ENST00000623958 2535 ntBASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 AC092068.3-201ENST00000587894 2016 ntBASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 AC015936.2-201ENST00000593177 259 ntBASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 MIR6775-201ENST00000617557 69 ntBASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNTNAP4Q9C0A0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 ANKRD19P-201ENST00000338192 862 ntBASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 MIR8072-201ENST00000614241 80 ntBASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 RPSAP52-203ENST00000622976 1023 ntBASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.73■□□□□ 0.91
CNTNAP4Q9C0A0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 AL391256.1-201ENST00000443260 1855 ntBASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 HIST3H2BA-201ENST00000436555 524 ntBASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 AP002490.2-201ENST00000524791 560 ntBASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 AC133552.6-201ENST00000613406 534 ntBASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNTNAP4Q9C0A0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms