Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRIM2Q9C040 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM2Q9C040 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.42■□□□□ 0.06
TRIM2Q9C040 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRIM2Q9C040 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM2Q9C040 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM2Q9C040 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM2Q9C040 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRIM2Q9C040 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM2Q9C040 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM2Q9C040 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRIM2Q9C040 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM2Q9C040 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM2Q9C040 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRIM2Q9C040 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM2Q9C040 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM2Q9C040 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.42■□□□□ 0.06
TRIM2Q9C040 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRIM2Q9C040 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM2Q9C040 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM2Q9C040 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM2Q9C040 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM2Q9C040 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM2Q9C040 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM2Q9C040 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRIM2Q9C040 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM2Q9C040 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM2Q9C040 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM2Q9C040 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM2Q9C040 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM2Q9C040 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM2Q9C040 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
TRIM2Q9C040 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM2Q9C040 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM2Q9C040 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM2Q9C040 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM2Q9C040 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM2Q9C040 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM2Q9C040 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM2Q9C040 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRIM2Q9C040 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM2Q9C040 AF186996.4-201ENST00000467186 377 ntBASIC15.41■□□□□ 0.06
TRIM2Q9C040 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM2Q9C040 RNA5SP419-201ENST00000515908 135 ntBASIC15.41■□□□□ 0.06
TRIM2Q9C040 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM2Q9C040 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM2Q9C040 AP001005.1-201ENST00000571755 1248 ntBASIC15.41■□□□□ 0.06
TRIM2Q9C040 AC091167.2-201ENST00000579581 588 ntBASIC15.41■□□□□ 0.06
TRIM2Q9C040 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM2Q9C040 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRIM2Q9C040 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM2Q9C040 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRIM2Q9C040 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRIM2Q9C040 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM2Q9C040 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM2Q9C040 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM2Q9C040 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM2Q9C040 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM2Q9C040 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRIM2Q9C040 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM2Q9C040 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM2Q9C040 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM2Q9C040 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM2Q9C040 AC006504.4-201ENST00000592118 1568 ntBASIC15.41■□□□□ 0.06
TRIM2Q9C040 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM2Q9C040 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRIM2Q9C040 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM2Q9C040 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM2Q9C040 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM2Q9C040 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
TRIM2Q9C040 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM2Q9C040 AC002310.6-201ENST00000624451 1377 ntBASIC15.4■□□□□ 0.06
TRIM2Q9C040 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM2Q9C040 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM2Q9C040 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRIM2Q9C040 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM2Q9C040 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM2Q9C040 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM2Q9C040 ELK2BP-201ENST00000415014 1224 ntBASIC15.4■□□□□ 0.06
TRIM2Q9C040 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM2Q9C040 AC073648.2-201ENST00000510116 352 ntBASIC15.4■□□□□ 0.06
TRIM2Q9C040 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.4■□□□□ 0.06
TRIM2Q9C040 MPDU1-223ENST00000582151 728 ntBASIC15.4■□□□□ 0.06
TRIM2Q9C040 BX640515.1-201ENST00000617215 977 ntBASIC15.4■□□□□ 0.06
TRIM2Q9C040 GGTLC5P-201ENST00000617623 998 ntBASIC15.4■□□□□ 0.06
TRIM2Q9C040 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM2Q9C040 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM2Q9C040 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM2Q9C040 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM2Q9C040 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM2Q9C040 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRIM2Q9C040 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRIM2Q9C040 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM2Q9C040 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM2Q9C040 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM2Q9C040 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM2Q9C040 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM2Q9C040 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM2Q9C040 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM2Q9C040 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms