Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL13Q99616 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL13Q99616 HMGA1P7-201ENST00000406908 502 ntBASIC14.01□□□□□ -0.17
CCL13Q99616 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.01□□□□□ -0.17
CCL13Q99616 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.01□□□□□ -0.17
CCL13Q99616 AC040169.1-201ENST00000565382 521 ntBASIC14.01□□□□□ -0.17
CCL13Q99616 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.01□□□□□ -0.17
CCL13Q99616 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.01□□□□□ -0.17
CCL13Q99616 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL13Q99616 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL13Q99616 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CCL13Q99616 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL13Q99616 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL13Q99616 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.01□□□□□ -0.17
CCL13Q99616 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL13Q99616 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL13Q99616 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL13Q99616 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL13Q99616 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
CCL13Q99616 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL13Q99616 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL13Q99616 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL13Q99616 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL13Q99616 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL13Q99616 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL13Q99616 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL13Q99616 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL13Q99616 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
CCL13Q99616 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL13Q99616 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
CCL13Q99616 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCL13Q99616 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL13Q99616 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL13Q99616 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14□□□□□ -0.17
CCL13Q99616 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CCL13Q99616 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14□□□□□ -0.17
CCL13Q99616 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14□□□□□ -0.17
CCL13Q99616 NMU-203ENST00000507338 658 ntTSL 3 BASIC14□□□□□ -0.17
CCL13Q99616 PGAM5P1-201ENST00000518923 814 ntBASIC14□□□□□ -0.17
CCL13Q99616 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
CCL13Q99616 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCL13Q99616 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14□□□□□ -0.17
CCL13Q99616 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL13Q99616 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14□□□□□ -0.17
CCL13Q99616 MED16-214ENST00000617672 554 ntTSL 5 BASIC14□□□□□ -0.17
CCL13Q99616 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14□□□□□ -0.17
CCL13Q99616 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14□□□□□ -0.17
CCL13Q99616 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL13Q99616 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CCL13Q99616 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL13Q99616 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL13Q99616 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL13Q99616 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL13Q99616 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL13Q99616 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14□□□□□ -0.17
CCL13Q99616 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14□□□□□ -0.17
CCL13Q99616 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14□□□□□ -0.17
CCL13Q99616 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14□□□□□ -0.17
CCL13Q99616 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 AGGF1P2-201ENST00000426656 2106 ntBASIC13.99□□□□□ -0.17
CCL13Q99616 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CCL13Q99616 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL13Q99616 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL13Q99616 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.99□□□□□ -0.17
CCL13Q99616 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.99□□□□□ -0.17
CCL13Q99616 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL13Q99616 AC074386.1-202ENST00000463561 864 ntBASIC13.99□□□□□ -0.17
CCL13Q99616 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL13Q99616 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
CCL13Q99616 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.99□□□□□ -0.17
CCL13Q99616 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.99□□□□□ -0.17
CCL13Q99616 PDPK2P-202ENST00000562415 1191 ntBASIC13.99□□□□□ -0.17
CCL13Q99616 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL13Q99616 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CCL13Q99616 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.99□□□□□ -0.17
CCL13Q99616 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL13Q99616 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL13Q99616 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms