Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 RARRES2P9-201ENST00000565168 469 ntBASIC16.71■□□□□ 0.27
SIPA1Q96FS4 RN7SL204P-201ENST00000582831 262 ntBASIC16.71■□□□□ 0.27
SIPA1Q96FS4 AC073389.1-201ENST00000595595 795 ntBASIC16.71■□□□□ 0.27
SIPA1Q96FS4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 AC018529.1-201ENST00000613063 361 ntBASIC16.71■□□□□ 0.27
SIPA1Q96FS4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
SIPA1Q96FS4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
SIPA1Q96FS4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.7■□□□□ 0.26
SIPA1Q96FS4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 AP3S2-216ENST00000617003 1561 ntBASIC16.7■□□□□ 0.26
SIPA1Q96FS4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 UGT1A2P-201ENST00000454886 866 ntBASIC16.7■□□□□ 0.26
SIPA1Q96FS4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 AC003101.2-201ENST00000612557 442 ntBASIC16.7■□□□□ 0.26
SIPA1Q96FS4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIPA1Q96FS4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.69■□□□□ 0.26
SIPA1Q96FS4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms