Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A3Q93084 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.63■□□□□ 0.41
ATP2A3Q93084 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A3Q93084 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A3Q93084 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A3Q93084 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.63■□□□□ 0.41
ATP2A3Q93084 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.63■□□□□ 0.41
ATP2A3Q93084 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP2A3Q93084 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.63■□□□□ 0.41
ATP2A3Q93084 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.63■□□□□ 0.41
ATP2A3Q93084 AC004835.2-201ENST00000603762 682 ntBASIC17.63■□□□□ 0.41
ATP2A3Q93084 AC027612.4-201ENST00000605371 583 ntBASIC17.63■□□□□ 0.41
ATP2A3Q93084 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.63■□□□□ 0.41
ATP2A3Q93084 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A3Q93084 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ATP2A3Q93084 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
ATP2A3Q93084 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.63■□□□□ 0.41
ATP2A3Q93084 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A3Q93084 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A3Q93084 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A3Q93084 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A3Q93084 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP2A3Q93084 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A3Q93084 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A3Q93084 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ATP2A3Q93084 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A3Q93084 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
ATP2A3Q93084 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A3Q93084 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.62■□□□□ 0.41
ATP2A3Q93084 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
ATP2A3Q93084 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A3Q93084 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A3Q93084 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A3Q93084 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A3Q93084 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A3Q93084 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ATP2A3Q93084 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.62■□□□□ 0.41
ATP2A3Q93084 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A3Q93084 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP2A3Q93084 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A3Q93084 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP2A3Q93084 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A3Q93084 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A3Q93084 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.62■□□□□ 0.41
ATP2A3Q93084 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP2A3Q93084 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP2A3Q93084 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A3Q93084 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.62■□□□□ 0.41
ATP2A3Q93084 AL513210.1-201ENST00000629608 234 ntBASIC17.62■□□□□ 0.41
ATP2A3Q93084 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.62■□□□□ 0.41
ATP2A3Q93084 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A3Q93084 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A3Q93084 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A3Q93084 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ATP2A3Q93084 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A3Q93084 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A3Q93084 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ATP2A3Q93084 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A3Q93084 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.62■□□□□ 0.41
ATP2A3Q93084 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP2A3Q93084 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A3Q93084 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A3Q93084 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A3Q93084 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ATP2A3Q93084 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A3Q93084 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2A3Q93084 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP2A3Q93084 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2A3Q93084 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP2A3Q93084 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2A3Q93084 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2A3Q93084 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.61■□□□□ 0.41
ATP2A3Q93084 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.61■□□□□ 0.41
ATP2A3Q93084 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2A3Q93084 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.61■□□□□ 0.41
ATP2A3Q93084 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ATP2A3Q93084 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP2A3Q93084 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2A3Q93084 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
ATP2A3Q93084 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP2A3Q93084 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.61■□□□□ 0.41
ATP2A3Q93084 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2A3Q93084 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ATP2A3Q93084 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2A3Q93084 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.61■□□□□ 0.41
ATP2A3Q93084 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP2A3Q93084 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP2A3Q93084 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ATP2A3Q93084 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ATP2A3Q93084 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.6■□□□□ 0.41
ATP2A3Q93084 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A3Q93084 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A3Q93084 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.6■□□□□ 0.41
ATP2A3Q93084 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A3Q93084 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
ATP2A3Q93084 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A3Q93084 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A3Q93084 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ATP2A3Q93084 AC002056.1-201ENST00000395613 760 ntBASIC17.6■□□□□ 0.41
ATP2A3Q93084 TSEN15P1-201ENST00000423257 515 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms