Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HPS1Q92902 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HPS1Q92902 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.4■□□□□ 0.06
HPS1Q92902 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.4■□□□□ 0.06
HPS1Q92902 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC15.4■□□□□ 0.06
HPS1Q92902 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.4■□□□□ 0.06
HPS1Q92902 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.4■□□□□ 0.06
HPS1Q92902 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.4■□□□□ 0.06
HPS1Q92902 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.4■□□□□ 0.06
HPS1Q92902 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.4■□□□□ 0.06
HPS1Q92902 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HPS1Q92902 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
HPS1Q92902 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HPS1Q92902 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HPS1Q92902 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HPS1Q92902 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HPS1Q92902 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HPS1Q92902 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HPS1Q92902 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.4■□□□□ 0.06
HPS1Q92902 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HPS1Q92902 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HPS1Q92902 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HPS1Q92902 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
HPS1Q92902 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
HPS1Q92902 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HPS1Q92902 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HPS1Q92902 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.4■□□□□ 0.06
HPS1Q92902 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.39■□□□□ 0.05
HPS1Q92902 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HPS1Q92902 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
HPS1Q92902 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HPS1Q92902 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HPS1Q92902 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.39■□□□□ 0.05
HPS1Q92902 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.39■□□□□ 0.05
HPS1Q92902 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.39■□□□□ 0.05
HPS1Q92902 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HPS1Q92902 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.39■□□□□ 0.05
HPS1Q92902 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HPS1Q92902 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
HPS1Q92902 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HPS1Q92902 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.39■□□□□ 0.05
HPS1Q92902 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HPS1Q92902 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HPS1Q92902 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HPS1Q92902 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
HPS1Q92902 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.39■□□□□ 0.05
HPS1Q92902 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.39■□□□□ 0.05
HPS1Q92902 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.39■□□□□ 0.05
HPS1Q92902 AP003733.1-201ENST00000491725 852 ntBASIC15.39■□□□□ 0.05
HPS1Q92902 RN7SL510P-201ENST00000581311 263 ntBASIC15.39■□□□□ 0.05
HPS1Q92902 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.39■□□□□ 0.05
HPS1Q92902 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HPS1Q92902 LINC01711-201ENST00000598340 967 ntBASIC15.39■□□□□ 0.05
HPS1Q92902 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.39■□□□□ 0.05
HPS1Q92902 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HPS1Q92902 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.39■□□□□ 0.05
HPS1Q92902 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HPS1Q92902 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HPS1Q92902 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HPS1Q92902 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HPS1Q92902 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HPS1Q92902 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HPS1Q92902 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HPS1Q92902 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
HPS1Q92902 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HPS1Q92902 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HPS1Q92902 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HPS1Q92902 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HPS1Q92902 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HPS1Q92902 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
HPS1Q92902 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
HPS1Q92902 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.38■□□□□ 0.05
HPS1Q92902 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.38■□□□□ 0.05
HPS1Q92902 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.38■□□□□ 0.05
HPS1Q92902 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.38■□□□□ 0.05
HPS1Q92902 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.38■□□□□ 0.05
HPS1Q92902 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.38■□□□□ 0.05
HPS1Q92902 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.38■□□□□ 0.05
HPS1Q92902 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.38■□□□□ 0.05
HPS1Q92902 AL121772.3-201ENST00000610840 674 ntBASIC15.38■□□□□ 0.05
HPS1Q92902 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HPS1Q92902 CFTRP2-201ENST00000634304 199 ntBASIC15.38■□□□□ 0.05
HPS1Q92902 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms