Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTF1Q92541 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTF1Q92541 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTF1Q92541 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC21.73■■□□□ 1.07
RTF1Q92541 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTF1Q92541 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTF1Q92541 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTF1Q92541 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTF1Q92541 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC21.73■■□□□ 1.07
RTF1Q92541 MIR770-201ENST00000390219 98 ntBASIC21.73■■□□□ 1.07
RTF1Q92541 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC21.73■■□□□ 1.07
RTF1Q92541 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC21.73■■□□□ 1.07
RTF1Q92541 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC21.73■■□□□ 1.07
RTF1Q92541 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.73■■□□□ 1.07
RTF1Q92541 AC105233.2-201ENST00000523697 349 ntBASIC21.73■■□□□ 1.07
RTF1Q92541 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC21.73■■□□□ 1.07
RTF1Q92541 AF228730.5-201ENST00000530288 346 ntBASIC21.73■■□□□ 1.07
RTF1Q92541 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.73■■□□□ 1.07
RTF1Q92541 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RTF1Q92541 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTF1Q92541 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTF1Q92541 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTF1Q92541 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTF1Q92541 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTF1Q92541 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTF1Q92541 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTF1Q92541 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTF1Q92541 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTF1Q92541 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTF1Q92541 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTF1Q92541 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC21.72■■□□□ 1.07
RTF1Q92541 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTF1Q92541 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
RTF1Q92541 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTF1Q92541 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTF1Q92541 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTF1Q92541 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC21.72■■□□□ 1.07
RTF1Q92541 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC21.72■■□□□ 1.07
RTF1Q92541 SPDYE14P-201ENST00000442619 822 ntBASIC21.72■■□□□ 1.07
RTF1Q92541 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC21.72■■□□□ 1.07
RTF1Q92541 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTF1Q92541 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTF1Q92541 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC21.72■■□□□ 1.07
RTF1Q92541 ALG1L8P-201ENST00000533887 760 ntBASIC21.72■■□□□ 1.07
RTF1Q92541 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC21.72■■□□□ 1.07
RTF1Q92541 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.72■■□□□ 1.07
RTF1Q92541 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTF1Q92541 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTF1Q92541 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTF1Q92541 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTF1Q92541 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTF1Q92541 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC21.72■■□□□ 1.07
RTF1Q92541 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTF1Q92541 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTF1Q92541 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTF1Q92541 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTF1Q92541 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RTF1Q92541 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.71■■□□□ 1.07
RTF1Q92541 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RTF1Q92541 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTF1Q92541 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTF1Q92541 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC21.71■■□□□ 1.07
RTF1Q92541 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RTF1Q92541 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTF1Q92541 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
RTF1Q92541 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTF1Q92541 DPM2-202ENST00000373110 738 ntTSL 2 BASIC21.71■■□□□ 1.07
RTF1Q92541 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RTF1Q92541 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.71■■□□□ 1.07
RTF1Q92541 SPDYE7P-202ENST00000420373 878 ntBASIC21.71■■□□□ 1.07
RTF1Q92541 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC21.71■■□□□ 1.07
RTF1Q92541 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.71■■□□□ 1.07
RTF1Q92541 PRYP6-201ENST00000514804 343 ntBASIC21.71■■□□□ 1.07
RTF1Q92541 GATD1-206ENST00000526325 756 ntTSL 5 BASIC21.71■■□□□ 1.07
RTF1Q92541 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTF1Q92541 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC21.71■■□□□ 1.07
RTF1Q92541 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RTF1Q92541 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC21.71■■□□□ 1.07
RTF1Q92541 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTF1Q92541 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC21.71■■□□□ 1.07
RTF1Q92541 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RTF1Q92541 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC21.71■■□□□ 1.07
RTF1Q92541 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTF1Q92541 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC21.71■■□□□ 1.07
RTF1Q92541 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RTF1Q92541 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC21.71■■□□□ 1.07
RTF1Q92541 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTF1Q92541 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RTF1Q92541 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC21.71■■□□□ 1.07
RTF1Q92541 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTF1Q92541 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTF1Q92541 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RTF1Q92541 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
RTF1Q92541 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC21.7■■□□□ 1.06
RTF1Q92541 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RTF1Q92541 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RTF1Q92541 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RTF1Q92541 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RTF1Q92541 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTF1Q92541 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms