Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF3IP1Q8TDR0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.46■□□□□ 0.38
TRAF3IP1Q8TDR0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
TRAF3IP1Q8TDR0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.46■□□□□ 0.38
TRAF3IP1Q8TDR0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TRAF3IP1Q8TDR0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.46■□□□□ 0.38
TRAF3IP1Q8TDR0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRAF3IP1Q8TDR0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 AL121912.1-201ENST00000603683 238 ntBASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 GGTLC5P-201ENST00000617623 998 ntBASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP1Q8TDR0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 RPS2P28-201ENST00000314255 741 ntBASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 DUSP5P1-201ENST00000441325 1139 ntBASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 TP73-AS1-207ENST00000624167 988 ntBASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 AL139011.1-202ENST00000642063 584 ntBASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TRAF3IP1Q8TDR0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms