Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.66□□□□□ -0.06
CPEB3Q8NE35 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 AC084018.2-201ENST00000613093 2607 ntBASIC14.65□□□□□ -0.06
CPEB3Q8NE35 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 AL022342.1-201ENST00000400363 863 ntBASIC14.65□□□□□ -0.06
CPEB3Q8NE35 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 AC007967.2-201ENST00000432613 625 ntBASIC14.65□□□□□ -0.06
CPEB3Q8NE35 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPEB3Q8NE35 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 AL671710.1-201ENST00000610245 2349 ntBASIC14.64□□□□□ -0.07
CPEB3Q8NE35 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 KRT18P2-201ENST00000447938 1258 ntBASIC14.64□□□□□ -0.07
CPEB3Q8NE35 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 AC064836.3-201ENST00000607928 673 ntBASIC14.64□□□□□ -0.07
CPEB3Q8NE35 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPEB3Q8NE35 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CPEB3Q8NE35 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CPEB3Q8NE35 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
CPEB3Q8NE35 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPEB3Q8NE35 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.63□□□□□ -0.07
CPEB3Q8NE35 HLA-A-202ENST00000376806 1854 ntBASIC14.63□□□□□ -0.07
CPEB3Q8NE35 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPEB3Q8NE35 PCDHA14-201ENST00000506751 2298 ntBASIC14.63□□□□□ -0.07
CPEB3Q8NE35 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CPEB3Q8NE35 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.63□□□□□ -0.07
CPEB3Q8NE35 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CPEB3Q8NE35 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms