Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 LINC02012-201ENST00000608206 1725 ntBASIC17.22■□□□□ 0.35
PAF1Q8N7H5 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 PMS2P1-201ENST00000431037 1228 ntBASIC17.22■□□□□ 0.35
PAF1Q8N7H5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 KRT18P58-201ENST00000527480 1120 ntBASIC17.22■□□□□ 0.35
PAF1Q8N7H5 AC145285.3-201ENST00000564603 959 ntBASIC17.22■□□□□ 0.35
PAF1Q8N7H5 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 AC010654.1-201ENST00000615722 808 ntBASIC17.22■□□□□ 0.35
PAF1Q8N7H5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.21■□□□□ 0.35
PAF1Q8N7H5 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 AL021920.2-201ENST00000624828 1351 ntBASIC17.21■□□□□ 0.35
PAF1Q8N7H5 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 AC087163.2-201ENST00000457299 853 ntBASIC17.21■□□□□ 0.35
PAF1Q8N7H5 POLD2P1-201ENST00000511220 997 ntBASIC17.21■□□□□ 0.35
PAF1Q8N7H5 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PAF1Q8N7H5 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.21■□□□□ 0.34
PAF1Q8N7H5 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PAF1Q8N7H5 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PAF1Q8N7H5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PAF1Q8N7H5 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 AP000347.1-202ENST00000435868 847 ntBASIC17.2■□□□□ 0.34
PAF1Q8N7H5 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 VN2R19P-201ENST00000442399 1052 ntBASIC17.2■□□□□ 0.34
PAF1Q8N7H5 AL591424.1-201ENST00000442569 1213 ntBASIC17.2■□□□□ 0.34
PAF1Q8N7H5 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 KRT18P3-201ENST00000451602 1288 ntBASIC17.2■□□□□ 0.34
PAF1Q8N7H5 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.2■□□□□ 0.34
PAF1Q8N7H5 AC034105.1-201ENST00000563488 319 ntBASIC17.2■□□□□ 0.34
PAF1Q8N7H5 AC140113.2-201ENST00000604370 208 ntBASIC17.2■□□□□ 0.34
PAF1Q8N7H5 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms