Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 AC112191.1-201ENST00000523689 701 ntBASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 AC055717.3-201ENST00000622967 595 ntBASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 AL139384.1-201ENST00000612143 3047 ntBASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 AC105020.1-201ENST00000435356 2205 ntBASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 ELL2P1-201ENST00000413990 1906 ntBASIC17.08■□□□□ 0.32
PCDH20Q8N6Y1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 AC092919.2-201ENST00000623631 1645 ntBASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 AC002056.1-201ENST00000395613 760 ntBASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 AC211486.1-202ENST00000416371 468 ntBASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 AC004967.1-201ENST00000453589 447 ntBASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 AC211476.1-201ENST00000503899 468 ntBASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 MIR4469-201ENST00000583919 79 ntBASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 AL691403.2-201ENST00000618460 490 ntBASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH20Q8N6Y1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 MIR4492-201ENST00000581627 80 ntBASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms