Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 MIR346-201ENST00000362234 95 ntBASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 AL627223.1-201ENST00000416693 442 ntBASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 AC008267.7-201ENST00000624570 1194 ntBASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ARHGEF39Q8N4T4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 GGT3P-204ENST00000453783 1664 ntBASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 KRT8P23-201ENST00000560090 1207 ntBASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 SNHG9-202ENST00000564014 471 ntBASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 FOXO1B-201ENST00000504678 1527 ntBASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ARHGEF39Q8N4T4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ARHGEF39Q8N4T4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ARHGEF39Q8N4T4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.71■□□□□ 0.1
ARHGEF39Q8N4T4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.1
ARHGEF39Q8N4T4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 PRORSD1P-202ENST00000563365 2154 ntBASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms