Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC22.68■■□□□ 1.22
LTBP4Q8N2S1 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC22.68■■□□□ 1.22
LTBP4Q8N2S1 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC22.68■■□□□ 1.22
LTBP4Q8N2S1 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LTBP4Q8N2S1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LTBP4Q8N2S1 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC22.68■■□□□ 1.22
LTBP4Q8N2S1 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LTBP4Q8N2S1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 DPM2-202ENST00000373110 738 ntTSL 2 BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 HSPB1P2-201ENST00000448722 546 ntBASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 NAT9-222ENST00000583476 583 ntTSL 3 BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 AC011491.1-203ENST00000637688 543 ntBASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LTBP4Q8N2S1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 MIR769-201ENST00000390225 118 ntBASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 PTPA-218ENST00000435132 618 ntTSL 2 BASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 AL133466.1-201ENST00000447582 150 ntBASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 CFL1-206ENST00000527344 962 ntTSL 2 BASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 NPM1P43-201ENST00000558669 786 ntBASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 CYGB-203ENST00000589145 788 ntTSL 3 BASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 REXO1L9P-201ENST00000604264 2108 ntBASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 AC015818.8-201ENST00000587907 1519 ntBASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC22.66■■□□□ 1.22
LTBP4Q8N2S1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
LTBP4Q8N2S1 FOS-202ENST00000535987 1402 ntTSL 2 BASIC22.65■■□□□ 1.22
LTBP4Q8N2S1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
LTBP4Q8N2S1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LTBP4Q8N2S1 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LTBP4Q8N2S1 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC22.65■■□□□ 1.22
LTBP4Q8N2S1 SUPT4H1P2-201ENST00000501248 353 ntBASIC22.65■■□□□ 1.22
LTBP4Q8N2S1 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC22.65■■□□□ 1.22
LTBP4Q8N2S1 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LTBP4Q8N2S1 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC22.65■■□□□ 1.22
LTBP4Q8N2S1 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
LTBP4Q8N2S1 AC138649.2-201ENST00000615886 705 ntBASIC22.65■■□□□ 1.22
LTBP4Q8N2S1 AC138951.2-201ENST00000623455 1161 ntBASIC22.65■■□□□ 1.22
LTBP4Q8N2S1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.65■■□□□ 1.22
LTBP4Q8N2S1 AL021920.2-201ENST00000624828 1351 ntBASIC22.65■■□□□ 1.22
LTBP4Q8N2S1 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC22.65■■□□□ 1.22
LTBP4Q8N2S1 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
LTBP4Q8N2S1 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
LTBP4Q8N2S1 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
LTBP4Q8N2S1 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
LTBP4Q8N2S1 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC22.64■■□□□ 1.22
LTBP4Q8N2S1 FAM197Y7-201ENST00000432892 766 ntBASIC22.64■■□□□ 1.22
LTBP4Q8N2S1 POM121L10P-201ENST00000436994 1285 ntBASIC22.64■■□□□ 1.22
LTBP4Q8N2S1 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC22.64■■□□□ 1.22
LTBP4Q8N2S1 PPOX-204ENST00000462866 473 ntTSL 5 BASIC22.64■■□□□ 1.22
LTBP4Q8N2S1 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC22.64■■□□□ 1.22
LTBP4Q8N2S1 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
LTBP4Q8N2S1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
LTBP4Q8N2S1 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
LTBP4Q8N2S1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
LTBP4Q8N2S1 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
LTBP4Q8N2S1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LTBP4Q8N2S1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LTBP4Q8N2S1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.64■■□□□ 1.21
LTBP4Q8N2S1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC22.64■■□□□ 1.21
LTBP4Q8N2S1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
LTBP4Q8N2S1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC22.64■■□□□ 1.21
LTBP4Q8N2S1 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LTBP4Q8N2S1 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LTBP4Q8N2S1 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms