Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.94□□□□□ -0.02
LRRC28Q86X40 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
LRRC28Q86X40 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRC28Q86X40 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.94□□□□□ -0.02
LRRC28Q86X40 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.94□□□□□ -0.02
LRRC28Q86X40 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRC28Q86X40 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LRRC28Q86X40 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.94□□□□□ -0.02
LRRC28Q86X40 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRC28Q86X40 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRC28Q86X40 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRC28Q86X40 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRC28Q86X40 AC004870.1-201ENST00000315132 882 ntBASIC14.94□□□□□ -0.02
LRRC28Q86X40 MYCLP1-201ENST00000372451 1075 ntBASIC14.94□□□□□ -0.02
LRRC28Q86X40 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRC28Q86X40 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRC28Q86X40 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.94□□□□□ -0.02
LRRC28Q86X40 FAAHP1-202ENST00000446499 1238 ntBASIC14.94□□□□□ -0.02
LRRC28Q86X40 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LRRC28Q86X40 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.94□□□□□ -0.02
LRRC28Q86X40 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRC28Q86X40 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRC28Q86X40 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.94□□□□□ -0.02
LRRC28Q86X40 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.94□□□□□ -0.02
LRRC28Q86X40 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.94□□□□□ -0.02
LRRC28Q86X40 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRC28Q86X40 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.94□□□□□ -0.02
LRRC28Q86X40 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRC28Q86X40 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRC28Q86X40 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.94□□□□□ -0.02
LRRC28Q86X40 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRC28Q86X40 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.94□□□□□ -0.02
LRRC28Q86X40 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LRRC28Q86X40 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRC28Q86X40 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.94□□□□□ -0.02
LRRC28Q86X40 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRC28Q86X40 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRC28Q86X40 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LRRC28Q86X40 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
LRRC28Q86X40 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRC28Q86X40 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRC28Q86X40 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRC28Q86X40 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LRRC28Q86X40 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRC28Q86X40 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
LRRC28Q86X40 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRC28Q86X40 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRC28Q86X40 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
LRRC28Q86X40 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.93□□□□□ -0.02
LRRC28Q86X40 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRC28Q86X40 AL391256.1-201ENST00000443260 1855 ntBASIC14.93□□□□□ -0.02
LRRC28Q86X40 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRC28Q86X40 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRC28Q86X40 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRC28Q86X40 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRC28Q86X40 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRC28Q86X40 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.93□□□□□ -0.02
LRRC28Q86X40 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.93□□□□□ -0.02
LRRC28Q86X40 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.93□□□□□ -0.02
LRRC28Q86X40 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
LRRC28Q86X40 RCN1P2-201ENST00000398357 915 ntBASIC14.93□□□□□ -0.02
LRRC28Q86X40 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.93□□□□□ -0.02
LRRC28Q86X40 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.93□□□□□ -0.02
LRRC28Q86X40 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.93□□□□□ -0.02
LRRC28Q86X40 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRC28Q86X40 AC011467.2-201ENST00000598425 242 ntBASIC14.93□□□□□ -0.02
LRRC28Q86X40 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRC28Q86X40 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
LRRC28Q86X40 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRC28Q86X40 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRC28Q86X40 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRC28Q86X40 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.93□□□□□ -0.02
LRRC28Q86X40 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRC28Q86X40 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRC28Q86X40 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.93□□□□□ -0.02
LRRC28Q86X40 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRC28Q86X40 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRC28Q86X40 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 ALOX12P2-203ENST00000570921 1945 ntBASIC14.92□□□□□ -0.02
LRRC28Q86X40 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms