Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SCXQ7RTU7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SCXQ7RTU7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC11.15□□□□□ -0.62
SCXQ7RTU7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SCXQ7RTU7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SCXQ7RTU7 CROCCP2-202ENST00000412962 2773 ntBASIC11.15□□□□□ -0.62
SCXQ7RTU7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SCXQ7RTU7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SCXQ7RTU7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SCXQ7RTU7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SCXQ7RTU7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SCXQ7RTU7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SCXQ7RTU7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SCXQ7RTU7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SCXQ7RTU7 COX5BP2-201ENST00000392354 334 ntBASIC11.15□□□□□ -0.62
SCXQ7RTU7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SCXQ7RTU7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 AC007967.2-201ENST00000432613 625 ntBASIC11.15□□□□□ -0.62
SCXQ7RTU7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 RNA5SP416-201ENST00000516838 111 ntBASIC11.15□□□□□ -0.62
SCXQ7RTU7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 PGAM5P1-201ENST00000518923 814 ntBASIC11.15□□□□□ -0.62
SCXQ7RTU7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SCXQ7RTU7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 AC005593.1-201ENST00000624894 515 ntBASIC11.15□□□□□ -0.62
SCXQ7RTU7 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SCXQ7RTU7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 AL023806.1-201ENST00000603994 1649 ntBASIC11.15□□□□□ -0.62
SCXQ7RTU7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SCXQ7RTU7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SCXQ7RTU7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SCXQ7RTU7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 SIGLEC16-201ENST00000599858 1437 ntBASIC11.15□□□□□ -0.62
SCXQ7RTU7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SCXQ7RTU7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SCXQ7RTU7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SCXQ7RTU7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC11.15□□□□□ -0.63
SCXQ7RTU7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC11.15□□□□□ -0.63
SCXQ7RTU7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC11.15□□□□□ -0.63
SCXQ7RTU7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 AL020989.1-201ENST00000422979 469 ntBASIC11.14□□□□□ -0.63
SCXQ7RTU7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 SLC25A6P5-201ENST00000435663 894 ntBASIC11.14□□□□□ -0.63
SCXQ7RTU7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 DOC2GP-204ENST00000639052 2548 ntBASIC11.14□□□□□ -0.63
SCXQ7RTU7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
SCXQ7RTU7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SCXQ7RTU7 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms