Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 RNA5SP421-201ENST00000516864 134 ntBASIC17.79■□□□□ 0.44
DCLRE1AQ6PJP8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.79■□□□□ 0.44
DCLRE1AQ6PJP8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.79■□□□□ 0.44
DCLRE1AQ6PJP8 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.79■□□□□ 0.44
DCLRE1AQ6PJP8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.79■□□□□ 0.44
DCLRE1AQ6PJP8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.79■□□□□ 0.44
DCLRE1AQ6PJP8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
DCLRE1AQ6PJP8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DCLRE1AQ6PJP8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
DCLRE1AQ6PJP8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DCLRE1AQ6PJP8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.79■□□□□ 0.44
DCLRE1AQ6PJP8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
DCLRE1AQ6PJP8 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DCLRE1AQ6PJP8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.79■□□□□ 0.44
DCLRE1AQ6PJP8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
DCLRE1AQ6PJP8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
DCLRE1AQ6PJP8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DCLRE1AQ6PJP8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 AC055876.3-201ENST00000431496 288 ntBASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 AC138649.4-201ENST00000612222 287 ntBASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCLRE1AQ6PJP8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 AC107890.1-201ENST00000422478 521 ntBASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 PRYP6-201ENST00000514804 343 ntBASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 AC140878.1-201ENST00000565277 250 ntBASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 AL390955.2-201ENST00000603032 514 ntBASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.77■□□□□ 0.44
DCLRE1AQ6PJP8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DCLRE1AQ6PJP8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.43
DCLRE1AQ6PJP8 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
DCLRE1AQ6PJP8 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DCLRE1AQ6PJP8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
DCLRE1AQ6PJP8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DCLRE1AQ6PJP8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
DCLRE1AQ6PJP8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.77■□□□□ 0.43
DCLRE1AQ6PJP8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
DCLRE1AQ6PJP8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.76■□□□□ 0.43
DCLRE1AQ6PJP8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DCLRE1AQ6PJP8 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
DCLRE1AQ6PJP8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
DCLRE1AQ6PJP8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DCLRE1AQ6PJP8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DCLRE1AQ6PJP8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DCLRE1AQ6PJP8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
DCLRE1AQ6PJP8 AP3S2-216ENST00000617003 1561 ntBASIC17.76■□□□□ 0.43
DCLRE1AQ6PJP8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DCLRE1AQ6PJP8 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DCLRE1AQ6PJP8 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DCLRE1AQ6PJP8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
DCLRE1AQ6PJP8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
DCLRE1AQ6PJP8 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.76■□□□□ 0.43
DCLRE1AQ6PJP8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.76■□□□□ 0.43
DCLRE1AQ6PJP8 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms