Protein–RNA interactions for Protein: Q6IQ49

SDE2, Protein SDE2 homolog, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2Q6IQ49 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 AC008894.3-201ENST00000624324 3103 ntBASIC16.92■□□□□ 0.3
SDE2Q6IQ49 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 TUBB8P12-201ENST00000308911 1335 ntBASIC16.92■□□□□ 0.3
SDE2Q6IQ49 TUBB7P-202ENST00000428444 1305 ntBASIC16.92■□□□□ 0.3
SDE2Q6IQ49 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 TUBB8P7-204ENST00000567960 1332 ntBASIC16.92■□□□□ 0.3
SDE2Q6IQ49 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SDE2Q6IQ49 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 FO538757.1-201ENST00000623083 1397 ntBASIC16.91■□□□□ 0.3
SDE2Q6IQ49 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 SLC25A1P3-201ENST00000395415 828 ntBASIC16.91■□□□□ 0.3
SDE2Q6IQ49 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 TREML5P-201ENST00000421694 576 ntBASIC16.91■□□□□ 0.3
SDE2Q6IQ49 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SDE2Q6IQ49 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SDE2Q6IQ49 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SDE2Q6IQ49 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SDE2Q6IQ49 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SDE2Q6IQ49 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SDE2Q6IQ49 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.9■□□□□ 0.3
SDE2Q6IQ49 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SDE2Q6IQ49 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SDE2Q6IQ49 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SDE2Q6IQ49 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.9■□□□□ 0.3
SDE2Q6IQ49 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SDE2Q6IQ49 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms