Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 TIMM17BP1-201ENST00000545713 516 ntBASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 PDIA3P1-201ENST00000471856 1510 ntBASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC11.03□□□□□ -0.64
VPS13DQ5THJ4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
VPS13DQ5THJ4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
VPS13DQ5THJ4 SLC25A47P1-201ENST00000531577 414 ntBASIC11.02□□□□□ -0.64
VPS13DQ5THJ4 MIR5189-201ENST00000577370 114 ntBASIC11.02□□□□□ -0.64
VPS13DQ5THJ4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
VPS13DQ5THJ4 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.64
VPS13DQ5THJ4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
VPS13DQ5THJ4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
VPS13DQ5THJ4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
VPS13DQ5THJ4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
VPS13DQ5THJ4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
VPS13DQ5THJ4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.02□□□□□ -0.64
VPS13DQ5THJ4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 AC099548.2-209ENST00000480264 625 ntBASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 PARP8-206ENST00000503665 572 ntTSL 4 BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 FAM8A2P-201ENST00000528813 1142 ntBASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 LINC02012-201ENST00000608206 1725 ntBASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VPS13DQ5THJ4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 AL133338.1-201ENST00000565695 1517 ntBASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms