Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 PGAM5P1-201ENST00000518923 814 ntBASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 KRT19P2-202ENST00000557173 1012 ntBASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 AC005915.1-201ENST00000624912 2018 ntBASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDLRAP1Q5SW96 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 AL391256.1-201ENST00000443260 1855 ntBASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 AC025580.3-201ENST00000617932 1424 ntBASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 AC002347.1-201ENST00000569543 541 ntBASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDLRAP1Q5SW96 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
LDLRAP1Q5SW96 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
LDLRAP1Q5SW96 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LDLRAP1Q5SW96 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.64■□□□□ 0.25
LDLRAP1Q5SW96 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LDLRAP1Q5SW96 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LDLRAP1Q5SW96 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LDLRAP1Q5SW96 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.64■□□□□ 0.25
LDLRAP1Q5SW96 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LDLRAP1Q5SW96 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LDLRAP1Q5SW96 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms