Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CCDC96Q2M329 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CCDC96Q2M329 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC96Q2M329 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC96Q2M329 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC96Q2M329 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC96Q2M329 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC96Q2M329 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CCDC96Q2M329 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC96Q2M329 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC96Q2M329 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC96Q2M329 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC96Q2M329 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC96Q2M329 AL139400.1-201ENST00000366220 510 ntBASIC19.44■□□□□ 0.7
CCDC96Q2M329 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC96Q2M329 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC96Q2M329 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC96Q2M329 AC093520.2-201ENST00000561830 333 ntBASIC19.44■□□□□ 0.7
CCDC96Q2M329 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.44■□□□□ 0.7
CCDC96Q2M329 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.44■□□□□ 0.7
CCDC96Q2M329 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC96Q2M329 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC96Q2M329 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC96Q2M329 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CCDC96Q2M329 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC96Q2M329 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC96Q2M329 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC96Q2M329 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC96Q2M329 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC96Q2M329 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC96Q2M329 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC96Q2M329 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC96Q2M329 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC96Q2M329 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC96Q2M329 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC96Q2M329 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC96Q2M329 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.43■□□□□ 0.7
CCDC96Q2M329 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC96Q2M329 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC96Q2M329 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC96Q2M329 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC96Q2M329 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC96Q2M329 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC96Q2M329 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC96Q2M329 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC96Q2M329 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC96Q2M329 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC96Q2M329 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC96Q2M329 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC96Q2M329 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC96Q2M329 SPCS2P4-201ENST00000436160 681 ntBASIC19.43■□□□□ 0.7
CCDC96Q2M329 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC96Q2M329 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC96Q2M329 IGHV3-62-201ENST00000520057 340 ntBASIC19.43■□□□□ 0.7
CCDC96Q2M329 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC96Q2M329 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC96Q2M329 AC004449.1-201ENST00000564240 433 ntBASIC19.43■□□□□ 0.7
CCDC96Q2M329 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CCDC96Q2M329 AC021097.1-201ENST00000607902 574 ntBASIC19.43■□□□□ 0.7
CCDC96Q2M329 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CCDC96Q2M329 AL671710.1-201ENST00000610245 2349 ntBASIC19.43■□□□□ 0.7
CCDC96Q2M329 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC96Q2M329 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CCDC96Q2M329 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC96Q2M329 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC96Q2M329 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC96Q2M329 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC96Q2M329 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC96Q2M329 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC96Q2M329 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC96Q2M329 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC96Q2M329 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC96Q2M329 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC96Q2M329 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC96Q2M329 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC96Q2M329 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC96Q2M329 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC96Q2M329 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC96Q2M329 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC96Q2M329 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC96Q2M329 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC96Q2M329 KRT18P32-201ENST00000424695 1287 ntBASIC19.42■□□□□ 0.7
CCDC96Q2M329 AC069335.1-201ENST00000489972 472 ntBASIC19.42■□□□□ 0.7
CCDC96Q2M329 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC96Q2M329 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC96Q2M329 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.42■□□□□ 0.7
CCDC96Q2M329 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC96Q2M329 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC96Q2M329 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC96Q2M329 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC96Q2M329 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC96Q2M329 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC96Q2M329 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCDC96Q2M329 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC96Q2M329 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC96Q2M329 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC96Q2M329 UXT-AS1-201ENST00000590504 1525 ntBASIC19.41■□□□□ 0.7
CCDC96Q2M329 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC96Q2M329 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC96Q2M329 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms