Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.87■□□□□ 0.77
PDS5AQ29RF7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDS5AQ29RF7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDS5AQ29RF7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PDS5AQ29RF7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 AC241585.1-201ENST00000433527 519 ntBASIC19.86■□□□□ 0.77
PDS5AQ29RF7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 AC004890.2-204ENST00000481968 304 ntBASIC19.86■□□□□ 0.77
PDS5AQ29RF7 INGX-202ENST00000489074 768 ntBASIC19.86■□□□□ 0.77
PDS5AQ29RF7 RNA5SP410-201ENST00000516285 106 ntBASIC19.86■□□□□ 0.77
PDS5AQ29RF7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 AC024267.1-201ENST00000582320 895 ntBASIC19.86■□□□□ 0.77
PDS5AQ29RF7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 AC078925.2-201ENST00000624013 1973 ntBASIC19.86■□□□□ 0.77
PDS5AQ29RF7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.86■□□□□ 0.77
PDS5AQ29RF7 AC100757.3-201ENST00000622361 1406 ntBASIC19.85■□□□□ 0.77
PDS5AQ29RF7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 IGHV3-42-201ENST00000520410 361 ntBASIC19.85■□□□□ 0.77
PDS5AQ29RF7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 MIR4745-201ENST00000577608 62 ntBASIC19.85■□□□□ 0.77
PDS5AQ29RF7 AL133215.2-201ENST00000609242 977 ntBASIC19.85■□□□□ 0.77
PDS5AQ29RF7 AL138828.2-201ENST00000615812 383 ntBASIC19.85■□□□□ 0.77
PDS5AQ29RF7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 PCGF3-213ENST00000620529 1899 ntBASIC19.85■□□□□ 0.77
PDS5AQ29RF7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PDS5AQ29RF7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 FAM207CP-201ENST00000443486 507 ntBASIC19.84■□□□□ 0.77
PDS5AQ29RF7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 AC105021.1-202ENST00000570572 669 ntBASIC19.84■□□□□ 0.77
PDS5AQ29RF7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms