Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN20P56880 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.37■□□□□ 0.05
CLDN20P56880 AL591424.1-201ENST00000442569 1213 ntBASIC15.37■□□□□ 0.05
CLDN20P56880 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
CLDN20P56880 AC087163.2-201ENST00000457299 853 ntBASIC15.37■□□□□ 0.05
CLDN20P56880 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.37■□□□□ 0.05
CLDN20P56880 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.37■□□□□ 0.05
CLDN20P56880 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CLDN20P56880 AC010654.1-201ENST00000615722 808 ntBASIC15.37■□□□□ 0.05
CLDN20P56880 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN20P56880 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN20P56880 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN20P56880 OR6D1P-203ENST00000641209 4860 ntBASIC15.37■□□□□ 0.05
CLDN20P56880 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN20P56880 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN20P56880 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CLDN20P56880 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN20P56880 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CLDN20P56880 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN20P56880 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.37■□□□□ 0.05
CLDN20P56880 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN20P56880 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN20P56880 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN20P56880 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
CLDN20P56880 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN20P56880 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN20P56880 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CLDN20P56880 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
CLDN20P56880 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
CLDN20P56880 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN20P56880 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDN20P56880 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CLDN20P56880 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN20P56880 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CLDN20P56880 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.36■□□□□ 0.05
CLDN20P56880 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDN20P56880 KRT18P2-201ENST00000447938 1258 ntBASIC15.36■□□□□ 0.05
CLDN20P56880 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDN20P56880 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.36■□□□□ 0.05
CLDN20P56880 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
CLDN20P56880 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN20P56880 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN20P56880 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDN20P56880 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 HYMAI-201ENST00000635591 3347 ntBASIC15.36■□□□□ 0.05
CLDN20P56880 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CLDN20P56880 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDN20P56880 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN20P56880 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLDN20P56880 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
CLDN20P56880 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDN20P56880 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN20P56880 CYP2T1P-202ENST00000641596 2535 ntBASIC15.36■□□□□ 0.05
CLDN20P56880 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN20P56880 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN20P56880 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN20P56880 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN20P56880 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CLDN20P56880 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN20P56880 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.35■□□□□ 0.05
CLDN20P56880 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDN20P56880 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN20P56880 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDN20P56880 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CLDN20P56880 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN20P56880 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN20P56880 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDN20P56880 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDN20P56880 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CLDN20P56880 IGLL3P-201ENST00000412472 434 ntBASIC15.35■□□□□ 0.05
CLDN20P56880 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDN20P56880 HCG4B-203ENST00000450128 991 ntBASIC15.35■□□□□ 0.05
CLDN20P56880 SLC25A6P2-201ENST00000497974 877 ntBASIC15.35■□□□□ 0.05
CLDN20P56880 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.35■□□□□ 0.05
CLDN20P56880 RNA5SP416-201ENST00000516838 111 ntBASIC15.35■□□□□ 0.05
CLDN20P56880 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDN20P56880 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.35■□□□□ 0.05
CLDN20P56880 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDN20P56880 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms