Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF140P52738 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF140P52738 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF140P52738 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ZNF140P52738 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF140P52738 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF140P52738 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF140P52738 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF140P52738 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ZNF140P52738 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF140P52738 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF140P52738 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ZNF140P52738 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ZNF140P52738 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF140P52738 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
ZNF140P52738 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF140P52738 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF140P52738 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF140P52738 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF140P52738 AL662844.4-201ENST00000606367 2838 ntBASIC16.59■□□□□ 0.25
ZNF140P52738 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF140P52738 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF140P52738 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ZNF140P52738 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ZNF140P52738 MIR574-201ENST00000385209 96 ntBASIC16.59■□□□□ 0.25
ZNF140P52738 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF140P52738 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF140P52738 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF140P52738 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF140P52738 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF140P52738 KRT18P58-201ENST00000527480 1120 ntBASIC16.59■□□□□ 0.25
ZNF140P52738 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF140P52738 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF140P52738 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.59■□□□□ 0.25
ZNF140P52738 AC068137.2-201ENST00000605408 478 ntBASIC16.59■□□□□ 0.25
ZNF140P52738 AC020765.3-201ENST00000613051 740 ntBASIC16.59■□□□□ 0.25
ZNF140P52738 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF140P52738 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF140P52738 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF140P52738 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF140P52738 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF140P52738 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF140P52738 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ZNF140P52738 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF140P52738 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ZNF140P52738 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF140P52738 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.58■□□□□ 0.25
ZNF140P52738 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF140P52738 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF140P52738 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF140P52738 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF140P52738 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF140P52738 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
ZNF140P52738 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.58■□□□□ 0.25
ZNF140P52738 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
ZNF140P52738 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF140P52738 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.58■□□□□ 0.24
ZNF140P52738 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.58■□□□□ 0.24
ZNF140P52738 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF140P52738 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF140P52738 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF140P52738 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF140P52738 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.58■□□□□ 0.24
ZNF140P52738 AP000347.1-202ENST00000435868 847 ntBASIC16.58■□□□□ 0.24
ZNF140P52738 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF140P52738 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF140P52738 AC074386.1-202ENST00000463561 864 ntBASIC16.58■□□□□ 0.24
ZNF140P52738 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.58■□□□□ 0.24
ZNF140P52738 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.58■□□□□ 0.24
ZNF140P52738 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
ZNF140P52738 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.58■□□□□ 0.24
ZNF140P52738 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF140P52738 LINC01144-201ENST00000626198 1710 ntBASIC16.58■□□□□ 0.24
ZNF140P52738 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.58■□□□□ 0.24
ZNF140P52738 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF140P52738 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
ZNF140P52738 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF140P52738 AC092364.2-201ENST00000596710 2692 ntBASIC16.58■□□□□ 0.24
ZNF140P52738 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF140P52738 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
ZNF140P52738 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF140P52738 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF140P52738 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.57■□□□□ 0.24
ZNF140P52738 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.57■□□□□ 0.24
ZNF140P52738 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF140P52738 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF140P52738 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF140P52738 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.57■□□□□ 0.24
ZNF140P52738 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF140P52738 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF140P52738 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.57■□□□□ 0.24
ZNF140P52738 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ZNF140P52738 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF140P52738 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ZNF140P52738 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF140P52738 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF140P52738 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF140P52738 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.57■□□□□ 0.24
ZNF140P52738 AC092474.2-201ENST00000424288 719 ntBASIC16.57■□□□□ 0.24
ZNF140P52738 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms