Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
CSNK1EP49674 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.29■□□□□ 0.2
CSNK1EP49674 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.29■□□□□ 0.2
CSNK1EP49674 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1EP49674 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1EP49674 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1EP49674 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1EP49674 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1EP49674 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1EP49674 AC005332.8-201ENST00000622750 2735 ntBASIC16.29■□□□□ 0.2
CSNK1EP49674 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CSNK1EP49674 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1EP49674 AC087499.5-201ENST00000452760 1342 ntBASIC16.29■□□□□ 0.2
CSNK1EP49674 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.29■□□□□ 0.2
CSNK1EP49674 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.29■□□□□ 0.2
CSNK1EP49674 LINC02012-201ENST00000608206 1725 ntBASIC16.29■□□□□ 0.2
CSNK1EP49674 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1EP49674 OR8S1-201ENST00000310194 1080 ntBASIC16.29■□□□□ 0.2
CSNK1EP49674 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1EP49674 FAM220BP-201ENST00000377689 816 ntBASIC16.29■□□□□ 0.2
CSNK1EP49674 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CSNK1EP49674 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.29■□□□□ 0.2
CSNK1EP49674 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.29■□□□□ 0.2
CSNK1EP49674 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1EP49674 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1EP49674 RNA5SP410-201ENST00000516285 106 ntBASIC16.29■□□□□ 0.2
CSNK1EP49674 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.29■□□□□ 0.2
CSNK1EP49674 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.29■□□□□ 0.2
CSNK1EP49674 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.29■□□□□ 0.2
CSNK1EP49674 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.29■□□□□ 0.2
CSNK1EP49674 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1EP49674 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.29■□□□□ 0.2
CSNK1EP49674 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.29■□□□□ 0.2
CSNK1EP49674 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1EP49674 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.29■□□□□ 0.2
CSNK1EP49674 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.29■□□□□ 0.2
CSNK1EP49674 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1EP49674 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1EP49674 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1EP49674 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1EP49674 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1EP49674 AC092053.1-201ENST00000605787 1936 ntBASIC16.29■□□□□ 0.2
CSNK1EP49674 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1EP49674 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1EP49674 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1EP49674 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1EP49674 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.28■□□□□ 0.2
CSNK1EP49674 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1EP49674 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1EP49674 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1EP49674 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1EP49674 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1EP49674 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1EP49674 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1EP49674 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1EP49674 TUBB8P12-201ENST00000308911 1335 ntBASIC16.28■□□□□ 0.2
CSNK1EP49674 TUBB7P-202ENST00000428444 1305 ntBASIC16.28■□□□□ 0.2
CSNK1EP49674 TUBB8P7-204ENST00000567960 1332 ntBASIC16.28■□□□□ 0.2
CSNK1EP49674 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CSNK1EP49674 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1EP49674 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.28■□□□□ 0.2
CSNK1EP49674 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1EP49674 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1EP49674 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1EP49674 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CSNK1EP49674 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.28■□□□□ 0.2
CSNK1EP49674 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1EP49674 AC098859.1-201ENST00000502915 1238 ntBASIC16.28■□□□□ 0.2
CSNK1EP49674 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.28■□□□□ 0.2
CSNK1EP49674 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.28■□□□□ 0.2
CSNK1EP49674 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.28■□□□□ 0.2
CSNK1EP49674 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.28■□□□□ 0.2
CSNK1EP49674 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.28■□□□□ 0.2
CSNK1EP49674 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.28■□□□□ 0.2
CSNK1EP49674 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.28■□□□□ 0.2
CSNK1EP49674 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CSNK1EP49674 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.28■□□□□ 0.2
CSNK1EP49674 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CSNK1EP49674 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.28■□□□□ 0.2
CSNK1EP49674 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.28■□□□□ 0.2
CSNK1EP49674 CROCCP2-202ENST00000412962 2773 ntBASIC16.28■□□□□ 0.2
CSNK1EP49674 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CSNK1EP49674 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.28■□□□□ 0.2
CSNK1EP49674 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1EP49674 AC007541.1-201ENST00000570282 1469 ntBASIC16.28■□□□□ 0.2
CSNK1EP49674 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CSNK1EP49674 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1EP49674 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1EP49674 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSNK1EP49674 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CSNK1EP49674 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSNK1EP49674 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CSNK1EP49674 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.27■□□□□ 0.2
CSNK1EP49674 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CSNK1EP49674 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSNK1EP49674 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSNK1EP49674 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CSNK1EP49674 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
CSNK1EP49674 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms