Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CENPFP49454 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CENPFP49454 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.57■□□□□ 0.56
CENPFP49454 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CENPFP49454 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC18.57■□□□□ 0.56
CENPFP49454 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.57■□□□□ 0.56
CENPFP49454 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.57■□□□□ 0.56
CENPFP49454 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.57■□□□□ 0.56
CENPFP49454 AC091167.2-201ENST00000579581 588 ntBASIC18.57■□□□□ 0.56
CENPFP49454 BTNL10-201ENST00000595971 695 ntBASIC18.57■□□□□ 0.56
CENPFP49454 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CENPFP49454 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CENPFP49454 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CENPFP49454 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.57■□□□□ 0.56
CENPFP49454 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.57■□□□□ 0.56
CENPFP49454 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CENPFP49454 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CENPFP49454 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.57■□□□□ 0.56
CENPFP49454 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CENPFP49454 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.57■□□□□ 0.56
CENPFP49454 AC092337.1-201ENST00000568699 1129 ntBASIC18.57■□□□□ 0.56
CENPFP49454 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.57■□□□□ 0.56
CENPFP49454 AL139327.4-201ENST00000612362 153 ntBASIC18.57■□□□□ 0.56
CENPFP49454 KRT8P12-202ENST00000472924 1397 ntBASIC18.56■□□□□ 0.56
CENPFP49454 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CENPFP49454 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.56■□□□□ 0.56
CENPFP49454 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CENPFP49454 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CENPFP49454 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CENPFP49454 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CENPFP49454 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CENPFP49454 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CENPFP49454 IGHJ2P-201ENST00000454480 60 ntBASIC18.56■□□□□ 0.56
CENPFP49454 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CENPFP49454 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.56■□□□□ 0.56
CENPFP49454 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CENPFP49454 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.56■□□□□ 0.56
CENPFP49454 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.56■□□□□ 0.56
CENPFP49454 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.56■□□□□ 0.56
CENPFP49454 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.56■□□□□ 0.56
CENPFP49454 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CENPFP49454 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CENPFP49454 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CENPFP49454 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.56■□□□□ 0.56
CENPFP49454 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.56■□□□□ 0.56
CENPFP49454 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.56■□□□□ 0.56
CENPFP49454 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.56■□□□□ 0.56
CENPFP49454 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.56■□□□□ 0.56
CENPFP49454 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
CENPFP49454 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CENPFP49454 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CENPFP49454 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CENPFP49454 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CENPFP49454 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.56■□□□□ 0.56
CENPFP49454 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CENPFP49454 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CENPFP49454 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.56■□□□□ 0.56
CENPFP49454 AC093525.9-201ENST00000624961 1746 ntBASIC18.56■□□□□ 0.56
CENPFP49454 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CENPFP49454 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CENPFP49454 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CENPFP49454 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CENPFP49454 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.55■□□□□ 0.56
CENPFP49454 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.55■□□□□ 0.56
CENPFP49454 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.55■□□□□ 0.56
CENPFP49454 RN7SL219P-201ENST00000582872 296 ntBASIC18.55■□□□□ 0.56
CENPFP49454 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC18.55■□□□□ 0.56
CENPFP49454 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.55■□□□□ 0.56
CENPFP49454 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CENPFP49454 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CENPFP49454 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CENPFP49454 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CENPFP49454 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CENPFP49454 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CENPFP49454 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CENPFP49454 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CENPFP49454 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.55■□□□□ 0.56
CENPFP49454 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.55■□□□□ 0.56
CENPFP49454 FRMD8P1-201ENST00000440433 1524 ntBASIC18.55■□□□□ 0.56
CENPFP49454 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CENPFP49454 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CENPFP49454 AC007551.1-201ENST00000457394 519 ntBASIC18.55■□□□□ 0.56
CENPFP49454 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CENPFP49454 KRT18P34-201ENST00000488218 1270 ntBASIC18.55■□□□□ 0.56
CENPFP49454 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CENPFP49454 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.55■□□□□ 0.56
CENPFP49454 AC105129.2-201ENST00000559536 390 ntBASIC18.55■□□□□ 0.56
CENPFP49454 AC006538.1-201ENST00000567905 1585 ntBASIC18.55■□□□□ 0.56
CENPFP49454 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.55■□□□□ 0.56
CENPFP49454 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CENPFP49454 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CENPFP49454 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CENPFP49454 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CENPFP49454 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CENPFP49454 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CENPFP49454 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CENPFP49454 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC18.55■□□□□ 0.56
CENPFP49454 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.55■□□□□ 0.56
CENPFP49454 AL033527.5-202ENST00000641632 1098 ntBASIC18.55■□□□□ 0.56
CENPFP49454 AC108860.2-201ENST00000562760 2183 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms