Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC13P31276 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.24■□□□□ 0.35
HOXC13P31276 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC13P31276 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXC13P31276 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXC13P31276 TSPY16P-201ENST00000449843 468 ntBASIC17.24■□□□□ 0.35
HOXC13P31276 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.24■□□□□ 0.35
HOXC13P31276 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
HOXC13P31276 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.24■□□□□ 0.35
HOXC13P31276 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.24■□□□□ 0.35
HOXC13P31276 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.24■□□□□ 0.35
HOXC13P31276 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.24■□□□□ 0.35
HOXC13P31276 AC015911.4-201ENST00000588022 1070 ntBASIC17.24■□□□□ 0.35
HOXC13P31276 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.24■□□□□ 0.35
HOXC13P31276 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXC13P31276 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC13P31276 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.24■□□□□ 0.35
HOXC13P31276 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC13P31276 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.24■□□□□ 0.35
HOXC13P31276 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
HOXC13P31276 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC13P31276 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC13P31276 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC13P31276 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC13P31276 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXC13P31276 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HOXC13P31276 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC13P31276 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC13P31276 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC13P31276 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HOXC13P31276 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HOXC13P31276 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC13P31276 AL512652.2-201ENST00000625156 1716 ntBASIC17.24■□□□□ 0.35
HOXC13P31276 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HOXC13P31276 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.23■□□□□ 0.35
HOXC13P31276 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC13P31276 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC13P31276 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC13P31276 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC13P31276 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HOXC13P31276 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC13P31276 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC13P31276 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HOXC13P31276 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC13P31276 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HOXC13P31276 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC13P31276 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC13P31276 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
HOXC13P31276 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
HOXC13P31276 TFAMP1-201ENST00000412727 736 ntBASIC17.23■□□□□ 0.35
HOXC13P31276 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.23■□□□□ 0.35
HOXC13P31276 TREML5P-201ENST00000421694 576 ntBASIC17.23■□□□□ 0.35
HOXC13P31276 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.23■□□□□ 0.35
HOXC13P31276 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC13P31276 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC13P31276 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.23■□□□□ 0.35
HOXC13P31276 AC109635.5-201ENST00000533593 962 ntBASIC17.23■□□□□ 0.35
HOXC13P31276 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.23■□□□□ 0.35
HOXC13P31276 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.23■□□□□ 0.35
HOXC13P31276 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.23■□□□□ 0.35
HOXC13P31276 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HOXC13P31276 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.23■□□□□ 0.35
HOXC13P31276 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.23■□□□□ 0.35
HOXC13P31276 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HOXC13P31276 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.23■□□□□ 0.35
HOXC13P31276 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC13P31276 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC13P31276 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HOXC13P31276 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.23■□□□□ 0.35
HOXC13P31276 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC13P31276 AC008677.1-201ENST00000519230 1561 ntBASIC17.23■□□□□ 0.35
HOXC13P31276 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC13P31276 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC13P31276 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC13P31276 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC13P31276 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC13P31276 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC13P31276 TUBB3P1-201ENST00000405796 1332 ntBASIC17.22■□□□□ 0.35
HOXC13P31276 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC13P31276 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.22■□□□□ 0.35
HOXC13P31276 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.22■□□□□ 0.35
HOXC13P31276 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC13P31276 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
HOXC13P31276 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.22■□□□□ 0.35
HOXC13P31276 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.22■□□□□ 0.35
HOXC13P31276 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC13P31276 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC13P31276 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC13P31276 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HOXC13P31276 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.22■□□□□ 0.35
HOXC13P31276 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.22■□□□□ 0.35
HOXC13P31276 AC002056.1-201ENST00000395613 760 ntBASIC17.22■□□□□ 0.35
HOXC13P31276 PMS2P4-201ENST00000412466 1052 ntBASIC17.22■□□□□ 0.35
HOXC13P31276 KRT18P32-201ENST00000424695 1287 ntBASIC17.22■□□□□ 0.35
HOXC13P31276 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.22■□□□□ 0.35
HOXC13P31276 SPCS2P4-201ENST00000436160 681 ntBASIC17.22■□□□□ 0.35
HOXC13P31276 AC140658.5-201ENST00000438532 169 ntBASIC17.22■□□□□ 0.35
HOXC13P31276 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.22■□□□□ 0.35
HOXC13P31276 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.22■□□□□ 0.35
HOXC13P31276 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms