Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.87□□□□□ -0.03
CD40LGP29965 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD40LGP29965 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CD40LGP29965 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD40LGP29965 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CD40LGP29965 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
CD40LGP29965 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD40LGP29965 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CD40LGP29965 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD40LGP29965 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD40LGP29965 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD40LGP29965 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.87□□□□□ -0.03
CD40LGP29965 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CD40LGP29965 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CD40LGP29965 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.87□□□□□ -0.03
CD40LGP29965 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CD40LGP29965 MMP23A-201ENST00000234610 1017 ntBASIC14.87□□□□□ -0.03
CD40LGP29965 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD40LGP29965 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.87□□□□□ -0.03
CD40LGP29965 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.87□□□□□ -0.03
CD40LGP29965 MIR1238-201ENST00000408483 83 ntBASIC14.87□□□□□ -0.03
CD40LGP29965 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.87□□□□□ -0.03
CD40LGP29965 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.87□□□□□ -0.03
CD40LGP29965 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.87□□□□□ -0.03
CD40LGP29965 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.87□□□□□ -0.03
CD40LGP29965 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.87□□□□□ -0.03
CD40LGP29965 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.87□□□□□ -0.03
CD40LGP29965 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.87□□□□□ -0.03
CD40LGP29965 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.87□□□□□ -0.03
CD40LGP29965 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.87□□□□□ -0.03
CD40LGP29965 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD40LGP29965 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.87□□□□□ -0.03
CD40LGP29965 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CD40LGP29965 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD40LGP29965 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CD40LGP29965 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.87□□□□□ -0.03
CD40LGP29965 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD40LGP29965 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD40LGP29965 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD40LGP29965 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CD40LGP29965 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
CD40LGP29965 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD40LGP29965 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD40LGP29965 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD40LGP29965 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.87□□□□□ -0.03
CD40LGP29965 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD40LGP29965 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CD40LGP29965 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD40LGP29965 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.87□□□□□ -0.03
CD40LGP29965 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD40LGP29965 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD40LGP29965 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD40LGP29965 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD40LGP29965 CICP14-201ENST00000629111 2732 ntBASIC14.86□□□□□ -0.03
CD40LGP29965 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.86□□□□□ -0.03
CD40LGP29965 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.86□□□□□ -0.03
CD40LGP29965 GGT4P-201ENST00000623672 1708 ntBASIC14.86□□□□□ -0.03
CD40LGP29965 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CD40LGP29965 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CD40LGP29965 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CD40LGP29965 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CD40LGP29965 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD40LGP29965 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD40LGP29965 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.86□□□□□ -0.03
CD40LGP29965 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD40LGP29965 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD40LGP29965 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD40LGP29965 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD40LGP29965 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.86□□□□□ -0.03
CD40LGP29965 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD40LGP29965 MESTP1-201ENST00000404287 994 ntBASIC14.86□□□□□ -0.03
CD40LGP29965 AL596275.1-201ENST00000423464 877 ntBASIC14.86□□□□□ -0.03
CD40LGP29965 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.86□□□□□ -0.03
CD40LGP29965 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.86□□□□□ -0.03
CD40LGP29965 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.86□□□□□ -0.03
CD40LGP29965 NAPSB-206ENST00000562112 1266 ntBASIC14.86□□□□□ -0.03
CD40LGP29965 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD40LGP29965 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.86□□□□□ -0.03
CD40LGP29965 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.86□□□□□ -0.03
CD40LGP29965 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.86□□□□□ -0.03
CD40LGP29965 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD40LGP29965 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.86□□□□□ -0.03
CD40LGP29965 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD40LGP29965 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD40LGP29965 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD40LGP29965 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD40LGP29965 AC006449.6-201ENST00000612330 2296 ntBASIC14.86□□□□□ -0.03
CD40LGP29965 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.86□□□□□ -0.03
CD40LGP29965 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CD40LGP29965 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CD40LGP29965 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD40LGP29965 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD40LGP29965 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD40LGP29965 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD40LGP29965 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD40LGP29965 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD40LGP29965 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD40LGP29965 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CD40LGP29965 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CD40LGP29965 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms