Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
GDF1P27539 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
GDF1P27539 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
GDF1P27539 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.14■□□□□ 0.01
GDF1P27539 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.14■□□□□ 0.01
GDF1P27539 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
GDF1P27539 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
GDF1P27539 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.14■□□□□ 0.01
GDF1P27539 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
GDF1P27539 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
GDF1P27539 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
GDF1P27539 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 TSEN15P1-201ENST00000423257 515 ntBASIC15.14■□□□□ 0.01
GDF1P27539 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.14■□□□□ 0.01
GDF1P27539 AC023141.5-201ENST00000458585 616 ntBASIC15.14■□□□□ 0.01
GDF1P27539 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.14■□□□□ 0.01
GDF1P27539 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.14■□□□□ 0.01
GDF1P27539 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.14■□□□□ 0.01
GDF1P27539 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.14■□□□□ 0.01
GDF1P27539 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.14■□□□□ 0.01
GDF1P27539 AC013467.2-201ENST00000605472 835 ntBASIC15.14■□□□□ 0.01
GDF1P27539 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.14■□□□□ 0.01
GDF1P27539 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.14■□□□□ 0.01
GDF1P27539 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
GDF1P27539 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.14■□□□□ 0.01
GDF1P27539 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
GDF1P27539 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
GDF1P27539 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GDF1P27539 AP001094.4-201ENST00000579008 2176 ntBASIC15.14■□□□□ 0.01
GDF1P27539 LINC00895-201ENST00000629028 1637 ntBASIC15.14■□□□□ 0.01
GDF1P27539 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.13■□□□□ 0.01
GDF1P27539 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDF1P27539 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GDF1P27539 AC016027.1-202ENST00000607927 1699 ntBASIC15.13■□□□□ 0.01
GDF1P27539 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDF1P27539 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
GDF1P27539 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GDF1P27539 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDF1P27539 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GDF1P27539 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDF1P27539 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDF1P27539 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GDF1P27539 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.13■□□□□ 0.01
GDF1P27539 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDF1P27539 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.13■□□□□ 0.01
GDF1P27539 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.13■□□□□ 0.01
GDF1P27539 AL391256.1-201ENST00000443260 1855 ntBASIC15.13■□□□□ 0.01
GDF1P27539 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.13■□□□□ 0.01
GDF1P27539 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GDF1P27539 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.13■□□□□ 0.01
GDF1P27539 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.13■□□□□ 0.01
GDF1P27539 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
GDF1P27539 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.13■□□□□ 0.01
GDF1P27539 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDF1P27539 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.13■□□□□ 0.01
GDF1P27539 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.13■□□□□ 0.01
GDF1P27539 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDF1P27539 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
GDF1P27539 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GDF1P27539 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.13■□□□□ 0.01
GDF1P27539 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
GDF1P27539 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GDF1P27539 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GDF1P27539 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDF1P27539 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GDF1P27539 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GDF1P27539 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
GDF1P27539 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
GDF1P27539 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
GDF1P27539 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms