Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACKR3P25106 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACKR3P25106 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.57□□□□□ -0.08
ACKR3P25106 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACKR3P25106 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ACKR3P25106 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ACKR3P25106 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.57□□□□□ -0.08
ACKR3P25106 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.57□□□□□ -0.08
ACKR3P25106 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.57□□□□□ -0.08
ACKR3P25106 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACKR3P25106 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACKR3P25106 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACKR3P25106 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ACKR3P25106 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACKR3P25106 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ACKR3P25106 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ACKR3P25106 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ACKR3P25106 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
ACKR3P25106 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ACKR3P25106 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.57□□□□□ -0.08
ACKR3P25106 LAGE3P1-201ENST00000425356 484 ntBASIC14.57□□□□□ -0.08
ACKR3P25106 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.57□□□□□ -0.08
ACKR3P25106 AC087163.2-201ENST00000457299 853 ntBASIC14.57□□□□□ -0.08
ACKR3P25106 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ACKR3P25106 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.57□□□□□ -0.08
ACKR3P25106 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.57□□□□□ -0.08
ACKR3P25106 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
ACKR3P25106 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.57□□□□□ -0.08
ACKR3P25106 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.57□□□□□ -0.08
ACKR3P25106 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ACKR3P25106 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ACKR3P25106 AC107918.4-202ENST00000641623 219 ntBASIC14.57□□□□□ -0.08
ACKR3P25106 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ACKR3P25106 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
ACKR3P25106 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ACKR3P25106 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ACKR3P25106 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.57□□□□□ -0.08
ACKR3P25106 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.57□□□□□ -0.08
ACKR3P25106 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
ACKR3P25106 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACKR3P25106 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACKR3P25106 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ACKR3P25106 LINC02199-201ENST00000506655 2702 ntBASIC14.57□□□□□ -0.08
ACKR3P25106 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ACKR3P25106 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
ACKR3P25106 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.56□□□□□ -0.08
ACKR3P25106 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
ACKR3P25106 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
ACKR3P25106 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
ACKR3P25106 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 AC006277.1-201ENST00000624348 1610 ntBASIC14.56□□□□□ -0.08
ACKR3P25106 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.56□□□□□ -0.08
ACKR3P25106 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.56□□□□□ -0.08
ACKR3P25106 PI4KAP1-204ENST00000612579 1703 ntBASIC14.56□□□□□ -0.08
ACKR3P25106 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.56□□□□□ -0.08
ACKR3P25106 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
ACKR3P25106 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ACKR3P25106 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.56□□□□□ -0.08
ACKR3P25106 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.56□□□□□ -0.08
ACKR3P25106 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.56□□□□□ -0.08
ACKR3P25106 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.56□□□□□ -0.08
ACKR3P25106 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.56□□□□□ -0.08
ACKR3P25106 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.56□□□□□ -0.08
ACKR3P25106 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
ACKR3P25106 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.56□□□□□ -0.08
ACKR3P25106 AL805961.1-202ENST00000641562 540 ntBASIC14.56□□□□□ -0.08
ACKR3P25106 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
ACKR3P25106 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
ACKR3P25106 TOP3BP1-201ENST00000420768 1380 ntBASIC14.56□□□□□ -0.08
ACKR3P25106 AC002310.6-201ENST00000624451 1377 ntBASIC14.56□□□□□ -0.08
ACKR3P25106 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
ACKR3P25106 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
ACKR3P25106 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.56□□□□□ -0.08
ACKR3P25106 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ACKR3P25106 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.56□□□□□ -0.08
ACKR3P25106 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.56□□□□□ -0.08
ACKR3P25106 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms