Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VCLP18206 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VCLP18206 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VCLP18206 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCLP18206 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCLP18206 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VCLP18206 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
VCLP18206 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCLP18206 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCLP18206 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VCLP18206 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VCLP18206 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.87■□□□□ 0.29
VCLP18206 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCLP18206 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.87■□□□□ 0.29
VCLP18206 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
VCLP18206 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCLP18206 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCLP18206 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
VCLP18206 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.87■□□□□ 0.29
VCLP18206 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.87■□□□□ 0.29
VCLP18206 SLC25A1P1-201ENST00000528351 927 ntBASIC16.87■□□□□ 0.29
VCLP18206 AC124947.2-201ENST00000547118 1133 ntBASIC16.87■□□□□ 0.29
VCLP18206 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCLP18206 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.87■□□□□ 0.29
VCLP18206 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.87■□□□□ 0.29
VCLP18206 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.87■□□□□ 0.29
VCLP18206 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.87■□□□□ 0.29
VCLP18206 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
VCLP18206 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.87■□□□□ 0.29
VCLP18206 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VCLP18206 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCLP18206 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCLP18206 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCLP18206 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.87■□□□□ 0.29
VCLP18206 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.87■□□□□ 0.29
VCLP18206 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
VCLP18206 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VCLP18206 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
VCLP18206 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VCLP18206 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.87■□□□□ 0.29
VCLP18206 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCLP18206 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.87■□□□□ 0.29
VCLP18206 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VCLP18206 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
VCLP18206 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.86■□□□□ 0.29
VCLP18206 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
VCLP18206 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCLP18206 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.86■□□□□ 0.29
VCLP18206 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
VCLP18206 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
VCLP18206 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
VCLP18206 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCLP18206 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.86■□□□□ 0.29
VCLP18206 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
VCLP18206 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.86■□□□□ 0.29
VCLP18206 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCLP18206 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.86■□□□□ 0.29
VCLP18206 MRPL20P1-201ENST00000400819 433 ntBASIC16.86■□□□□ 0.29
VCLP18206 AL591424.1-201ENST00000442569 1213 ntBASIC16.86■□□□□ 0.29
VCLP18206 AC009947.1-201ENST00000444350 727 ntBASIC16.86■□□□□ 0.29
VCLP18206 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.86■□□□□ 0.29
VCLP18206 KRT18P58-201ENST00000527480 1120 ntBASIC16.86■□□□□ 0.29
VCLP18206 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
VCLP18206 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.86■□□□□ 0.29
VCLP18206 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.86■□□□□ 0.29
VCLP18206 MIR4751-201ENST00000578027 74 ntBASIC16.86■□□□□ 0.29
VCLP18206 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.86■□□□□ 0.29
VCLP18206 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.86■□□□□ 0.29
VCLP18206 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCLP18206 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.86■□□□□ 0.29
VCLP18206 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCLP18206 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCLP18206 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VCLP18206 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCLP18206 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCLP18206 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
VCLP18206 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCLP18206 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCLP18206 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCLP18206 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VCLP18206 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCLP18206 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VCLP18206 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.86■□□□□ 0.29
VCLP18206 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCLP18206 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCLP18206 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
VCLP18206 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.86■□□□□ 0.29
VCLP18206 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.86■□□□□ 0.29
VCLP18206 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCLP18206 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
VCLP18206 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCLP18206 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VCLP18206 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
VCLP18206 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCLP18206 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VCLP18206 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCLP18206 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCLP18206 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.85■□□□□ 0.29
VCLP18206 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
VCLP18206 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms