Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN2P17655 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.3■□□□□ 0.68
CAPN2P17655 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN2P17655 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.3■□□□□ 0.68
CAPN2P17655 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN2P17655 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN2P17655 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN2P17655 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN2P17655 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN2P17655 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN2P17655 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
CAPN2P17655 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CAPN2P17655 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CAPN2P17655 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN2P17655 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.29■□□□□ 0.68
CAPN2P17655 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.29■□□□□ 0.68
CAPN2P17655 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN2P17655 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN2P17655 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
CAPN2P17655 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.29■□□□□ 0.68
CAPN2P17655 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.29■□□□□ 0.68
CAPN2P17655 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN2P17655 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
CAPN2P17655 FAM58DP-201ENST00000428076 619 ntBASIC19.29■□□□□ 0.68
CAPN2P17655 IGHV3-42-201ENST00000520410 361 ntBASIC19.29■□□□□ 0.68
CAPN2P17655 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CAPN2P17655 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN2P17655 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.29■□□□□ 0.68
CAPN2P17655 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN2P17655 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CAPN2P17655 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN2P17655 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
CAPN2P17655 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN2P17655 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN2P17655 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN2P17655 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN2P17655 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN2P17655 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN2P17655 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN2P17655 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN2P17655 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.28■□□□□ 0.68
CAPN2P17655 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN2P17655 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN2P17655 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.28■□□□□ 0.68
CAPN2P17655 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN2P17655 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN2P17655 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.28■□□□□ 0.68
CAPN2P17655 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN2P17655 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CAPN2P17655 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN2P17655 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN2P17655 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN2P17655 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN2P17655 COX5BP8-201ENST00000416911 349 ntBASIC19.28■□□□□ 0.68
CAPN2P17655 AC022494.1-201ENST00000466044 728 ntBASIC19.28■□□□□ 0.68
CAPN2P17655 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.28■□□□□ 0.68
CAPN2P17655 IGHV3-62-201ENST00000520057 340 ntBASIC19.28■□□□□ 0.68
CAPN2P17655 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.28■□□□□ 0.68
CAPN2P17655 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.28■□□□□ 0.68
CAPN2P17655 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CAPN2P17655 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
CAPN2P17655 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN2P17655 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN2P17655 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN2P17655 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.28■□□□□ 0.68
CAPN2P17655 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN2P17655 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN2P17655 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN2P17655 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN2P17655 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.27■□□□□ 0.68
CAPN2P17655 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN2P17655 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.27■□□□□ 0.68
CAPN2P17655 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN2P17655 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN2P17655 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN2P17655 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CAPN2P17655 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CAPN2P17655 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN2P17655 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN2P17655 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN2P17655 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN2P17655 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN2P17655 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN2P17655 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.27■□□□□ 0.68
CAPN2P17655 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN2P17655 TREML5P-201ENST00000421694 576 ntBASIC19.27■□□□□ 0.68
CAPN2P17655 ATP5G2P4-201ENST00000442175 420 ntBASIC19.27■□□□□ 0.68
CAPN2P17655 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.27■□□□□ 0.68
CAPN2P17655 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN2P17655 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.27■□□□□ 0.68
CAPN2P17655 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CAPN2P17655 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.27■□□□□ 0.68
CAPN2P17655 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.27■□□□□ 0.68
CAPN2P17655 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.27■□□□□ 0.68
CAPN2P17655 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN2P17655 AL135744.1-201ENST00000565098 629 ntBASIC19.27■□□□□ 0.68
CAPN2P17655 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN2P17655 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CAPN2P17655 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
CAPN2P17655 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms