Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.55■□□□□ 0.08
PRKCAP17252 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.55■□□□□ 0.08
PRKCAP17252 AC060834.1-201ENST00000443027 2032 ntBASIC15.55■□□□□ 0.08
PRKCAP17252 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRKCAP17252 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PRKCAP17252 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.55■□□□□ 0.08
PRKCAP17252 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRKCAP17252 FRMD8P1-201ENST00000440433 1524 ntBASIC15.55■□□□□ 0.08
PRKCAP17252 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRKCAP17252 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRKCAP17252 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.55■□□□□ 0.08
PRKCAP17252 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.55■□□□□ 0.08
PRKCAP17252 AC073621.1-201ENST00000392730 636 ntBASIC15.55■□□□□ 0.08
PRKCAP17252 AL031284.1-201ENST00000419297 478 ntBASIC15.55■□□□□ 0.08
PRKCAP17252 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.55■□□□□ 0.08
PRKCAP17252 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.55■□□□□ 0.08
PRKCAP17252 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.55■□□□□ 0.08
PRKCAP17252 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.55■□□□□ 0.08
PRKCAP17252 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.55■□□□□ 0.08
PRKCAP17252 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.55■□□□□ 0.08
PRKCAP17252 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.55■□□□□ 0.08
PRKCAP17252 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.55■□□□□ 0.08
PRKCAP17252 SLC25A6P4-201ENST00000586535 553 ntBASIC15.55■□□□□ 0.08
PRKCAP17252 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.55■□□□□ 0.08
PRKCAP17252 FAM215A-202ENST00000632077 792 ntBASIC15.55■□□□□ 0.08
PRKCAP17252 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.55■□□□□ 0.08
PRKCAP17252 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRKCAP17252 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PRKCAP17252 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRKCAP17252 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.55■□□□□ 0.08
PRKCAP17252 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRKCAP17252 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRKCAP17252 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRKCAP17252 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
PRKCAP17252 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.55■□□□□ 0.08
PRKCAP17252 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRKCAP17252 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRKCAP17252 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRKCAP17252 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRKCAP17252 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PRKCAP17252 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRKCAP17252 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PRKCAP17252 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRKCAP17252 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.54■□□□□ 0.08
PRKCAP17252 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
PRKCAP17252 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRKCAP17252 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRKCAP17252 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PRKCAP17252 TSPY26P-202ENST00000565928 3884 ntBASIC15.54■□□□□ 0.08
PRKCAP17252 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRKCAP17252 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRKCAP17252 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.54■□□□□ 0.08
PRKCAP17252 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRKCAP17252 AP002414.1-201ENST00000391405 1147 ntBASIC15.54■□□□□ 0.08
PRKCAP17252 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.54■□□□□ 0.08
PRKCAP17252 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRKCAP17252 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
PRKCAP17252 AC009078.2-202ENST00000463353 338 ntBASIC15.54■□□□□ 0.08
PRKCAP17252 AL662844.1-201ENST00000546340 181 ntBASIC15.54■□□□□ 0.08
PRKCAP17252 AC105339.3-201ENST00000560043 636 ntBASIC15.54■□□□□ 0.08
PRKCAP17252 AC012640.2-201ENST00000561606 901 ntBASIC15.54■□□□□ 0.08
PRKCAP17252 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.54■□□□□ 0.08
PRKCAP17252 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.54■□□□□ 0.08
PRKCAP17252 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRKCAP17252 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRKCAP17252 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.54■□□□□ 0.08
PRKCAP17252 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.54■□□□□ 0.08
PRKCAP17252 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRKCAP17252 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.54■□□□□ 0.08
PRKCAP17252 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PRKCAP17252 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRKCAP17252 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRKCAP17252 AC007950.2-201ENST00000615045 2347 ntBASIC15.54■□□□□ 0.08
PRKCAP17252 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.54■□□□□ 0.08
PRKCAP17252 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRKCAP17252 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRKCAP17252 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRKCAP17252 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRKCAP17252 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.53■□□□□ 0.08
PRKCAP17252 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRKCAP17252 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRKCAP17252 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRKCAP17252 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRKCAP17252 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRKCAP17252 AC243591.1-201ENST00000452967 1364 ntBASIC15.53■□□□□ 0.08
PRKCAP17252 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRKCAP17252 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRKCAP17252 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRKCAP17252 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.53■□□□□ 0.08
PRKCAP17252 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.53■□□□□ 0.08
PRKCAP17252 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.53■□□□□ 0.08
PRKCAP17252 PTCHD3P3-201ENST00000403073 906 ntBASIC15.53■□□□□ 0.08
PRKCAP17252 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRKCAP17252 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRKCAP17252 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.53■□□□□ 0.08
PRKCAP17252 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.53■□□□□ 0.08
PRKCAP17252 AC136632.2-201ENST00000512891 861 ntBASIC15.53■□□□□ 0.08
PRKCAP17252 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.53■□□□□ 0.08
PRKCAP17252 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.53■□□□□ 0.08
PRKCAP17252 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms