Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA4P12838 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA4P12838 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA4P12838 AC009336.1-201ENST00000608941 1553 ntBASIC13.68□□□□□ -0.22
DEFA4P12838 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA4P12838 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
DEFA4P12838 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
DEFA4P12838 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA4P12838 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.68□□□□□ -0.22
DEFA4P12838 POM121L3P-201ENST00000419331 1163 ntBASIC13.68□□□□□ -0.22
DEFA4P12838 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
DEFA4P12838 AP002383.4-201ENST00000442518 975 ntBASIC13.68□□□□□ -0.22
DEFA4P12838 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.68□□□□□ -0.22
DEFA4P12838 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.68□□□□□ -0.22
DEFA4P12838 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.68□□□□□ -0.22
DEFA4P12838 AC012615.1-201ENST00000565797 1299 ntBASIC13.68□□□□□ -0.22
DEFA4P12838 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.68□□□□□ -0.22
DEFA4P12838 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA4P12838 AC073592.5-201ENST00000624854 528 ntBASIC13.68□□□□□ -0.22
DEFA4P12838 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA4P12838 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA4P12838 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA4P12838 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA4P12838 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA4P12838 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA4P12838 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA4P12838 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
DEFA4P12838 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA4P12838 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA4P12838 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA4P12838 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
DEFA4P12838 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
DEFA4P12838 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.67□□□□□ -0.22
DEFA4P12838 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.67□□□□□ -0.22
DEFA4P12838 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.67□□□□□ -0.22
DEFA4P12838 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.67□□□□□ -0.22
DEFA4P12838 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.67□□□□□ -0.22
DEFA4P12838 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.67□□□□□ -0.22
DEFA4P12838 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.67□□□□□ -0.22
DEFA4P12838 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.67□□□□□ -0.22
DEFA4P12838 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.67□□□□□ -0.22
DEFA4P12838 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.67□□□□□ -0.22
DEFA4P12838 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
DEFA4P12838 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 MIR1224-201ENST00000408193 85 ntBASIC13.67□□□□□ -0.22
DEFA4P12838 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 AC099336.1-202ENST00000602961 463 ntBASIC13.67□□□□□ -0.22
DEFA4P12838 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.67□□□□□ -0.22
DEFA4P12838 AC092119.3-201ENST00000612618 583 ntBASIC13.67□□□□□ -0.22
DEFA4P12838 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.67□□□□□ -0.22
DEFA4P12838 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.67□□□□□ -0.22
DEFA4P12838 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
DEFA4P12838 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.67□□□□□ -0.22
DEFA4P12838 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.67□□□□□ -0.22
DEFA4P12838 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
DEFA4P12838 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
DEFA4P12838 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
DEFA4P12838 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.67□□□□□ -0.22
DEFA4P12838 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DEFA4P12838 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.66□□□□□ -0.22
DEFA4P12838 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA4P12838 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA4P12838 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA4P12838 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.66□□□□□ -0.22
DEFA4P12838 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA4P12838 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA4P12838 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.66□□□□□ -0.22
DEFA4P12838 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.66□□□□□ -0.22
DEFA4P12838 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
DEFA4P12838 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.66□□□□□ -0.22
DEFA4P12838 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA4P12838 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.66□□□□□ -0.22
DEFA4P12838 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA4P12838 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
DEFA4P12838 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.66□□□□□ -0.22
DEFA4P12838 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
DEFA4P12838 RCN1P2-201ENST00000398357 915 ntBASIC13.66□□□□□ -0.22
DEFA4P12838 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.66□□□□□ -0.22
DEFA4P12838 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms