Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.14■□□□□ 0.01
CLUP10909 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLUP10909 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLUP10909 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLUP10909 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
CLUP10909 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.14■□□□□ 0.01
CLUP10909 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLUP10909 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.14■□□□□ 0.01
CLUP10909 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLUP10909 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CLUP10909 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CLUP10909 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLUP10909 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLUP10909 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLUP10909 NUS1P2-201ENST00000417358 873 ntBASIC15.14■□□□□ 0.01
CLUP10909 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLUP10909 ABCD1P5-201ENST00000445663 754 ntBASIC15.14■□□□□ 0.01
CLUP10909 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.14■□□□□ 0.01
CLUP10909 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.14■□□□□ 0.01
CLUP10909 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.14■□□□□ 0.01
CLUP10909 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.14■□□□□ 0.01
CLUP10909 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.14■□□□□ 0.01
CLUP10909 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLUP10909 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLUP10909 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLUP10909 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLUP10909 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLUP10909 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLUP10909 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLUP10909 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLUP10909 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLUP10909 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLUP10909 LINC00895-201ENST00000629028 1637 ntBASIC15.14■□□□□ 0.01
CLUP10909 AC079776.2-201ENST00000641154 1609 ntBASIC15.14■□□□□ 0.01
CLUP10909 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
CLUP10909 AL021920.2-201ENST00000624828 1351 ntBASIC15.13■□□□□ 0.01
CLUP10909 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLUP10909 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLUP10909 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.13■□□□□ 0.01
CLUP10909 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLUP10909 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLUP10909 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.13■□□□□ 0.01
CLUP10909 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.13■□□□□ 0.01
CLUP10909 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
CLUP10909 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CLUP10909 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.13■□□□□ 0.01
CLUP10909 HYMAI-201ENST00000635591 3347 ntBASIC15.13■□□□□ 0.01
CLUP10909 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CLUP10909 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.13■□□□□ 0.01
CLUP10909 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLUP10909 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.13■□□□□ 0.01
CLUP10909 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CLUP10909 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CLUP10909 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLUP10909 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.13■□□□□ 0.01
CLUP10909 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLUP10909 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.13■□□□□ 0.01
CLUP10909 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.13■□□□□ 0.01
CLUP10909 POM121L3P-201ENST00000419331 1163 ntBASIC15.13■□□□□ 0.01
CLUP10909 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.13■□□□□ 0.01
CLUP10909 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.13■□□□□ 0.01
CLUP10909 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLUP10909 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.13■□□□□ 0.01
CLUP10909 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.13■□□□□ 0.01
CLUP10909 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLUP10909 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.13■□□□□ 0.01
CLUP10909 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLUP10909 AC092329.2-201ENST00000598402 547 ntBASIC15.13■□□□□ 0.01
CLUP10909 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.13■□□□□ 0.01
CLUP10909 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.13■□□□□ 0.01
CLUP10909 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.13■□□□□ 0.01
CLUP10909 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLUP10909 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CLUP10909 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLUP10909 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLUP10909 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLUP10909 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.13■□□□□ 0.01
CLUP10909 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLUP10909 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLUP10909 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLUP10909 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.12■□□□□ 0.01
CLUP10909 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.12■□□□□ 0.01
CLUP10909 AC243591.1-201ENST00000452967 1364 ntBASIC15.12■□□□□ 0.01
CLUP10909 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLUP10909 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
CLUP10909 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLUP10909 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLUP10909 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.12■□□□□ 0.01
CLUP10909 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLUP10909 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLUP10909 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLUP10909 AC006538.1-201ENST00000567905 1585 ntBASIC15.12■□□□□ 0.01
CLUP10909 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.12■□□□□ 0.01
CLUP10909 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLUP10909 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.12■□□□□ 0.01
CLUP10909 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.12■□□□□ 0.01
CLUP10909 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CLUP10909 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLUP10909 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLUP10909 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms