Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.52■□□□□ 0.23
CAPN1P07384 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CAPN1P07384 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.52■□□□□ 0.23
CAPN1P07384 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CAPN1P07384 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CAPN1P07384 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPN1P07384 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN1P07384 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN1P07384 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN1P07384 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CAPN1P07384 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CAPN1P07384 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CAPN1P07384 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN1P07384 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN1P07384 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CAPN1P07384 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN1P07384 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN1P07384 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPN1P07384 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
CAPN1P07384 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPN1P07384 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN1P07384 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPN1P07384 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.51■□□□□ 0.23
CAPN1P07384 AL591424.1-201ENST00000442569 1213 ntBASIC16.51■□□□□ 0.23
CAPN1P07384 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.51■□□□□ 0.23
CAPN1P07384 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.51■□□□□ 0.23
CAPN1P07384 AC092865.5-201ENST00000545435 363 ntBASIC16.51■□□□□ 0.23
CAPN1P07384 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.51■□□□□ 0.23
CAPN1P07384 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPN1P07384 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.51■□□□□ 0.23
CAPN1P07384 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CAPN1P07384 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN1P07384 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN1P07384 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN1P07384 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN1P07384 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN1P07384 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPN1P07384 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
CAPN1P07384 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN1P07384 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN1P07384 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN1P07384 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN1P07384 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN1P07384 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN1P07384 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN1P07384 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN1P07384 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN1P07384 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN1P07384 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPN1P07384 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPN1P07384 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN1P07384 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.5■□□□□ 0.23
CAPN1P07384 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CAPN1P07384 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPN1P07384 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN1P07384 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CAPN1P07384 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN1P07384 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPN1P07384 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.5■□□□□ 0.23
CAPN1P07384 BX842568.4-201ENST00000421222 227 ntBASIC16.5■□□□□ 0.23
CAPN1P07384 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
CAPN1P07384 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.5■□□□□ 0.23
CAPN1P07384 AP002490.2-201ENST00000524791 560 ntBASIC16.5■□□□□ 0.23
CAPN1P07384 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.5■□□□□ 0.23
CAPN1P07384 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN1P07384 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.5■□□□□ 0.23
CAPN1P07384 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.5■□□□□ 0.23
CAPN1P07384 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.5■□□□□ 0.23
CAPN1P07384 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
CAPN1P07384 AC004706.3-202ENST00000621574 984 ntBASIC16.5■□□□□ 0.23
CAPN1P07384 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN1P07384 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN1P07384 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN1P07384 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN1P07384 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN1P07384 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CAPN1P07384 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CAPN1P07384 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN1P07384 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN1P07384 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN1P07384 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN1P07384 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN1P07384 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN1P07384 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN1P07384 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN1P07384 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN1P07384 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN1P07384 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CAPN1P07384 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN1P07384 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN1P07384 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN1P07384 HLA-A-202ENST00000376806 1854 ntBASIC16.49■□□□□ 0.23
CAPN1P07384 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN1P07384 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.49■□□□□ 0.23
CAPN1P07384 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.49■□□□□ 0.23
CAPN1P07384 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.49■□□□□ 0.23
CAPN1P07384 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.49■□□□□ 0.23
CAPN1P07384 KRT18P3-201ENST00000451602 1288 ntBASIC16.49■□□□□ 0.23
CAPN1P07384 AC136632.2-201ENST00000512891 861 ntBASIC16.49■□□□□ 0.23
CAPN1P07384 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms