Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.37■□□□□ 0.85
CSF1RP07333 FAM207CP-201ENST00000443486 507 ntBASIC20.37■□□□□ 0.85
CSF1RP07333 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC20.37■□□□□ 0.85
CSF1RP07333 COX20P2-201ENST00000452636 358 ntBASIC20.37■□□□□ 0.85
CSF1RP07333 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CSF1RP07333 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CSF1RP07333 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20.37■□□□□ 0.85
CSF1RP07333 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC20.37■□□□□ 0.85
CSF1RP07333 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.37■□□□□ 0.85
CSF1RP07333 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.37■□□□□ 0.85
CSF1RP07333 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.37■□□□□ 0.85
CSF1RP07333 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.37■□□□□ 0.85
CSF1RP07333 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.37■□□□□ 0.85
CSF1RP07333 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CSF1RP07333 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSF1RP07333 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSF1RP07333 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSF1RP07333 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.37■□□□□ 0.85
CSF1RP07333 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CSF1RP07333 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSF1RP07333 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSF1RP07333 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSF1RP07333 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSF1RP07333 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSF1RP07333 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CSF1RP07333 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CSF1RP07333 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.36■□□□□ 0.85
CSF1RP07333 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.36■□□□□ 0.85
CSF1RP07333 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CSF1RP07333 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.36■□□□□ 0.85
CSF1RP07333 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CSF1RP07333 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CSF1RP07333 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CSF1RP07333 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CSF1RP07333 GGT3P-204ENST00000453783 1664 ntBASIC20.36■□□□□ 0.85
CSF1RP07333 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CSF1RP07333 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CSF1RP07333 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CSF1RP07333 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.36■□□□□ 0.85
CSF1RP07333 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CSF1RP07333 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CSF1RP07333 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CSF1RP07333 OARD1-208ENST00000469104 704 ntTSL 2 BASIC20.36■□□□□ 0.85
CSF1RP07333 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.36■□□□□ 0.85
CSF1RP07333 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.36■□□□□ 0.85
CSF1RP07333 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CSF1RP07333 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC20.36■□□□□ 0.85
CSF1RP07333 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC20.36■□□□□ 0.85
CSF1RP07333 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC20.36■□□□□ 0.85
CSF1RP07333 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CSF1RP07333 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CSF1RP07333 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CSF1RP07333 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CSF1RP07333 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CSF1RP07333 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.36■□□□□ 0.85
CSF1RP07333 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CSF1RP07333 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSF1RP07333 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.35■□□□□ 0.85
CSF1RP07333 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSF1RP07333 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CSF1RP07333 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.35■□□□□ 0.85
CSF1RP07333 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSF1RP07333 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSF1RP07333 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CSF1RP07333 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CSF1RP07333 AC009477.1-201ENST00000452936 217 ntBASIC20.35■□□□□ 0.85
CSF1RP07333 AL512638.1-201ENST00000457493 794 ntBASIC20.35■□□□□ 0.85
CSF1RP07333 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSF1RP07333 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CSF1RP07333 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.35■□□□□ 0.85
CSF1RP07333 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20.35■□□□□ 0.85
CSF1RP07333 TEX28P1-201ENST00000613479 1221 ntBASIC20.35■□□□□ 0.85
CSF1RP07333 TEX28P2-201ENST00000617764 1221 ntBASIC20.35■□□□□ 0.85
CSF1RP07333 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CSF1RP07333 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSF1RP07333 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSF1RP07333 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSF1RP07333 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSF1RP07333 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.35■□□□□ 0.85
CSF1RP07333 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSF1RP07333 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.35■□□□□ 0.85
CSF1RP07333 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.35■□□□□ 0.85
CSF1RP07333 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSF1RP07333 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSF1RP07333 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.35■□□□□ 0.85
CSF1RP07333 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CSF1RP07333 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CSF1RP07333 HLA-A-202ENST00000376806 1854 ntBASIC20.35■□□□□ 0.85
CSF1RP07333 PCGF3-213ENST00000620529 1899 ntBASIC20.35■□□□□ 0.85
CSF1RP07333 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CSF1RP07333 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CSF1RP07333 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CSF1RP07333 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CSF1RP07333 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSF1RP07333 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.34■□□□□ 0.85
CSF1RP07333 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSF1RP07333 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CSF1RP07333 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CSF1RP07333 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC20.34■□□□□ 0.85
CSF1RP07333 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms