Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOA4P06727 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.79■□□□□ 0.28
APOA4P06727 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
APOA4P06727 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOA4P06727 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APOA4P06727 AL031284.1-201ENST00000419297 478 ntBASIC16.79■□□□□ 0.28
APOA4P06727 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOA4P06727 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOA4P06727 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.79■□□□□ 0.28
APOA4P06727 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.79■□□□□ 0.28
APOA4P06727 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOA4P06727 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
APOA4P06727 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.79■□□□□ 0.28
APOA4P06727 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.79■□□□□ 0.28
APOA4P06727 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
APOA4P06727 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOA4P06727 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.79■□□□□ 0.28
APOA4P06727 FAM215A-202ENST00000632077 792 ntBASIC16.79■□□□□ 0.28
APOA4P06727 PGM5P2-202ENST00000637225 1043 ntBASIC16.79■□□□□ 0.28
APOA4P06727 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APOA4P06727 MTHFR-217ENST00000641820 1569 ntBASIC16.79■□□□□ 0.28
APOA4P06727 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOA4P06727 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
APOA4P06727 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOA4P06727 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.79■□□□□ 0.28
APOA4P06727 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOA4P06727 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOA4P06727 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOA4P06727 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOA4P06727 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.79■□□□□ 0.28
APOA4P06727 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOA4P06727 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.79■□□□□ 0.28
APOA4P06727 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.79■□□□□ 0.28
APOA4P06727 PI4KAP1-204ENST00000612579 1703 ntBASIC16.79■□□□□ 0.28
APOA4P06727 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
APOA4P06727 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.78■□□□□ 0.28
APOA4P06727 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
APOA4P06727 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.78■□□□□ 0.28
APOA4P06727 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
APOA4P06727 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
APOA4P06727 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
APOA4P06727 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
APOA4P06727 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.78■□□□□ 0.28
APOA4P06727 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APOA4P06727 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APOA4P06727 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APOA4P06727 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APOA4P06727 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APOA4P06727 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.78■□□□□ 0.28
APOA4P06727 AC073621.1-201ENST00000392730 636 ntBASIC16.78■□□□□ 0.28
APOA4P06727 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APOA4P06727 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.78■□□□□ 0.28
APOA4P06727 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.78■□□□□ 0.28
APOA4P06727 RPS15P9-201ENST00000494093 319 ntBASIC16.78■□□□□ 0.28
APOA4P06727 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.78■□□□□ 0.28
APOA4P06727 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.78■□□□□ 0.28
APOA4P06727 AP001005.1-201ENST00000571755 1248 ntBASIC16.78■□□□□ 0.28
APOA4P06727 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
APOA4P06727 TERC-201ENST00000602385 541 ntBASIC16.78■□□□□ 0.28
APOA4P06727 AL356488.2-201ENST00000602755 427 ntBASIC16.78■□□□□ 0.28
APOA4P06727 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.78■□□□□ 0.28
APOA4P06727 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.78■□□□□ 0.28
APOA4P06727 AF228730.7-201ENST00000641842 219 ntBASIC16.78■□□□□ 0.28
APOA4P06727 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APOA4P06727 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.78■□□□□ 0.28
APOA4P06727 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
APOA4P06727 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.78■□□□□ 0.28
APOA4P06727 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
APOA4P06727 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
APOA4P06727 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
APOA4P06727 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
APOA4P06727 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
APOA4P06727 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.78■□□□□ 0.28
APOA4P06727 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
APOA4P06727 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.78■□□□□ 0.28
APOA4P06727 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
APOA4P06727 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.78■□□□□ 0.28
APOA4P06727 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
APOA4P06727 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.78■□□□□ 0.28
APOA4P06727 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
APOA4P06727 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
APOA4P06727 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.78■□□□□ 0.28
APOA4P06727 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.78■□□□□ 0.28
APOA4P06727 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.77■□□□□ 0.28
APOA4P06727 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
APOA4P06727 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
APOA4P06727 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
APOA4P06727 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.77■□□□□ 0.28
APOA4P06727 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
APOA4P06727 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
APOA4P06727 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
APOA4P06727 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
APOA4P06727 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
APOA4P06727 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
APOA4P06727 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
APOA4P06727 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
APOA4P06727 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
APOA4P06727 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
APOA4P06727 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
APOA4P06727 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms