Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HLA-DQA2P01906 HLA-A-202ENST00000376806 1854 ntBASIC15.08■□□□□ 0.01
HLA-DQA2P01906 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA2P01906 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA2P01906 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA2P01906 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA2P01906 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA2P01906 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA2P01906 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.08■□□□□ 0
HLA-DQA2P01906 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
HLA-DQA2P01906 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA2P01906 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
HLA-DQA2P01906 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.08■□□□□ 0
HLA-DQA2P01906 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.08■□□□□ 0
HLA-DQA2P01906 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
HLA-DQA2P01906 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.08■□□□□ 0
HLA-DQA2P01906 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.08■□□□□ 0
HLA-DQA2P01906 AL732292.2-201ENST00000609649 430 ntBASIC15.08■□□□□ 0
HLA-DQA2P01906 AC073592.4-201ENST00000623827 446 ntBASIC15.08■□□□□ 0
HLA-DQA2P01906 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
HLA-DQA2P01906 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA2P01906 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA2P01906 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.08■□□□□ 0
HLA-DQA2P01906 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA2P01906 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
HLA-DQA2P01906 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA2P01906 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA2P01906 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.08■□□□□ 0
HLA-DQA2P01906 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA2P01906 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA2P01906 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA2P01906 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA2P01906 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA2P01906 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA2P01906 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA2P01906 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
HLA-DQA2P01906 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.08■□□□□ 0
HLA-DQA2P01906 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA2P01906 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
HLA-DQA2P01906 NCF1C-201ENST00000438382 1427 ntBASIC15.08■□□□□ 0
HLA-DQA2P01906 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.08■□□□□ 0
HLA-DQA2P01906 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
HLA-DQA2P01906 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
HLA-DQA2P01906 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQA2P01906 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.07■□□□□ 0
HLA-DQA2P01906 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.07■□□□□ 0
HLA-DQA2P01906 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.07■□□□□ 0
HLA-DQA2P01906 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
HLA-DQA2P01906 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
HLA-DQA2P01906 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 MIR1224-201ENST00000408193 85 ntBASIC15.07■□□□□ 0
HLA-DQA2P01906 UPK3BP1-201ENST00000428678 509 ntBASIC15.07■□□□□ 0
HLA-DQA2P01906 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.07■□□□□ 0
HLA-DQA2P01906 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.07■□□□□ 0
HLA-DQA2P01906 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.07■□□□□ 0
HLA-DQA2P01906 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.07■□□□□ 0
HLA-DQA2P01906 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
HLA-DQA2P01906 MIR3652-201ENST00000579335 131 ntBASIC15.07■□□□□ 0
HLA-DQA2P01906 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
HLA-DQA2P01906 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.07■□□□□ 0
HLA-DQA2P01906 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
HLA-DQA2P01906 AL022326.1-202ENST00000641533 845 ntBASIC15.07■□□□□ 0
HLA-DQA2P01906 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
HLA-DQA2P01906 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 AC243591.1-201ENST00000452967 1364 ntBASIC15.07■□□□□ 0
HLA-DQA2P01906 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.07■□□□□ 0
HLA-DQA2P01906 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
HLA-DQA2P01906 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
HLA-DQA2P01906 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.07■□□□□ 0
HLA-DQA2P01906 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.07■□□□□ 0
HLA-DQA2P01906 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
HLA-DQA2P01906 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.07■□□□□ 0
HLA-DQA2P01906 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQA2P01906 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.06■□□□□ 0
HLA-DQA2P01906 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQA2P01906 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.06■□□□□ 0
HLA-DQA2P01906 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.06■□□□□ 0
HLA-DQA2P01906 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms