Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
OPHN1O60890 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OPHN1O60890 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
OPHN1O60890 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.5■□□□□ 0.39
OPHN1O60890 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OPHN1O60890 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OPHN1O60890 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.5■□□□□ 0.39
OPHN1O60890 UBALD1-205ENST00000590891 2641 ntBASIC17.5■□□□□ 0.39
OPHN1O60890 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
OPHN1O60890 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OPHN1O60890 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
OPHN1O60890 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
OPHN1O60890 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
OPHN1O60890 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.5■□□□□ 0.39
OPHN1O60890 LINC00982-205ENST00000420957 435 ntBASIC17.5■□□□□ 0.39
OPHN1O60890 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.5■□□□□ 0.39
OPHN1O60890 BX005266.1-201ENST00000473402 457 ntBASIC17.5■□□□□ 0.39
OPHN1O60890 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
OPHN1O60890 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.5■□□□□ 0.39
OPHN1O60890 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
OPHN1O60890 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.5■□□□□ 0.39
OPHN1O60890 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.5■□□□□ 0.39
OPHN1O60890 AC005829.1-201ENST00000570002 483 ntBASIC17.5■□□□□ 0.39
OPHN1O60890 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.5■□□□□ 0.39
OPHN1O60890 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.5■□□□□ 0.39
OPHN1O60890 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OPHN1O60890 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OPHN1O60890 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OPHN1O60890 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.5■□□□□ 0.39
OPHN1O60890 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.5■□□□□ 0.39
OPHN1O60890 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OPHN1O60890 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
OPHN1O60890 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.5■□□□□ 0.39
OPHN1O60890 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
OPHN1O60890 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
OPHN1O60890 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
OPHN1O60890 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
OPHN1O60890 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
OPHN1O60890 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OPHN1O60890 TUBB8P12-201ENST00000308911 1335 ntBASIC17.49■□□□□ 0.39
OPHN1O60890 TUBB7P-202ENST00000428444 1305 ntBASIC17.49■□□□□ 0.39
OPHN1O60890 TUBB8P7-204ENST00000567960 1332 ntBASIC17.49■□□□□ 0.39
OPHN1O60890 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.49■□□□□ 0.39
OPHN1O60890 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OPHN1O60890 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.49■□□□□ 0.39
OPHN1O60890 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
OPHN1O60890 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OPHN1O60890 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
OPHN1O60890 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
OPHN1O60890 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.49■□□□□ 0.39
OPHN1O60890 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OPHN1O60890 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
OPHN1O60890 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
OPHN1O60890 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.49■□□□□ 0.39
OPHN1O60890 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.49■□□□□ 0.39
OPHN1O60890 AC108751.1-201ENST00000490852 363 ntBASIC17.49■□□□□ 0.39
OPHN1O60890 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.49■□□□□ 0.39
OPHN1O60890 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.49■□□□□ 0.39
OPHN1O60890 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.49■□□□□ 0.39
OPHN1O60890 MIR3197-201ENST00000582241 73 ntBASIC17.49■□□□□ 0.39
OPHN1O60890 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.49■□□□□ 0.39
OPHN1O60890 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
OPHN1O60890 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
OPHN1O60890 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OPHN1O60890 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.49■□□□□ 0.39
OPHN1O60890 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
OPHN1O60890 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
OPHN1O60890 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
OPHN1O60890 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
OPHN1O60890 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OPHN1O60890 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.49■□□□□ 0.39
OPHN1O60890 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
OPHN1O60890 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OPHN1O60890 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
OPHN1O60890 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.49■□□□□ 0.39
OPHN1O60890 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
OPHN1O60890 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
OPHN1O60890 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPHN1O60890 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
OPHN1O60890 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
OPHN1O60890 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
OPHN1O60890 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
OPHN1O60890 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPHN1O60890 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.48■□□□□ 0.39
OPHN1O60890 PCDH8P1-201ENST00000428983 2773 ntBASIC17.48■□□□□ 0.39
OPHN1O60890 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPHN1O60890 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
OPHN1O60890 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
OPHN1O60890 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPHN1O60890 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
OPHN1O60890 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.48■□□□□ 0.39
OPHN1O60890 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.48■□□□□ 0.39
OPHN1O60890 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
OPHN1O60890 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
OPHN1O60890 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
OPHN1O60890 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
OPHN1O60890 MCCD1P2-201ENST00000423228 335 ntBASIC17.48■□□□□ 0.39
OPHN1O60890 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.48■□□□□ 0.39
OPHN1O60890 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPHN1O60890 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms